BLASTX nr result

ID: Coptis21_contig00033807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033807
         (188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263584.1| PREDICTED: uncharacterized protein LOC100250...    72   6e-19
ref|XP_002518443.1| conserved hypothetical protein [Ricinus comm...    73   5e-18
ref|XP_002889903.1| hypothetical protein ARALYDRAFT_471341 [Arab...    68   8e-18
ref|NP_563896.1| uncharacterized protein [Arabidopsis thaliana] ...    67   1e-17
ref|XP_003547261.1| PREDICTED: uncharacterized protein LOC100798...    67   2e-17

>ref|XP_002263584.1| PREDICTED: uncharacterized protein LOC100250418 [Vitis vinifera]
           gi|302144103|emb|CBI23208.3| unnamed protein product
           [Vitis vinifera]
          Length = 339

 Score = 71.6 bits (174), Expect(2) = 6e-19
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 186 IPINYPLSIDDGCGSPNYQHMLVCLDTGKLEFPTPSGRYP 67
           IPINYP  IDDGCGSP Y+H+LVC D+G+LE  TPSGRYP
Sbjct: 52  IPINYPFGIDDGCGSPYYRHILVCPDSGQLELRTPSGRYP 91



 Score = 47.4 bits (111), Expect(2) = 6e-19
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -2

Query: 67  PVQNISYSDPHILVSDPFMWKC 2
           PV+++SYSDPHILVSDPFMW C
Sbjct: 91  PVRSLSYSDPHILVSDPFMWNC 112


>ref|XP_002518443.1| conserved hypothetical protein [Ricinus communis]
           gi|223542288|gb|EEF43830.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 340

 Score = 72.8 bits (177), Expect(2) = 5e-18
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = -3

Query: 186 IPINYPLSIDDGCGSPNYQHMLVCLDTGKLEFPTPSGRY 70
           IPINYP  IDDGCGSP Y+HMLVC D+G LEF TPSGRY
Sbjct: 52  IPINYPFGIDDGCGSPYYRHMLVCSDSGNLEFRTPSGRY 90



 Score = 43.1 bits (100), Expect(2) = 5e-18
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -2

Query: 64  VQNISYSDPHILVSDPFMWKC 2
           V +ISYSDPHI+V+DPFMW C
Sbjct: 92  VHSISYSDPHIIVADPFMWNC 112


>ref|XP_002889903.1| hypothetical protein ARALYDRAFT_471341 [Arabidopsis lyrata subsp.
           lyrata] gi|297335745|gb|EFH66162.1| hypothetical protein
           ARALYDRAFT_471341 [Arabidopsis lyrata subsp. lyrata]
          Length = 329

 Score = 67.8 bits (164), Expect(2) = 8e-18
 Identities = 30/41 (73%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = -3

Query: 186 IPINYPLSIDDGCGSPNYQHMLVCLDTG-KLEFPTPSGRYP 67
           IPINYP SIDDGCGSP Y+HML+C D   KLE  TPSG+YP
Sbjct: 38  IPINYPFSIDDGCGSPYYRHMLICSDNNTKLELRTPSGKYP 78



 Score = 47.4 bits (111), Expect(2) = 8e-18
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -2

Query: 67  PVQNISYSDPHILVSDPFMWKC 2
           PV++ISYSDPH+LVSDPFMW C
Sbjct: 78  PVKSISYSDPHLLVSDPFMWNC 99


>ref|NP_563896.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13507567|gb|AAK28646.1|AF360349_1 unknown protein
           [Arabidopsis thaliana] gi|3157936|gb|AAC17619.1|
           Contains similarity to NFATc3 gb|U28807 from Mus
           musculus [Arabidopsis thaliana]
           gi|15293303|gb|AAK93762.1| unknown protein [Arabidopsis
           thaliana] gi|332190693|gb|AEE28814.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 329

 Score = 67.4 bits (163), Expect(2) = 1e-17
 Identities = 30/41 (73%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = -3

Query: 186 IPINYPLSIDDGCGSPNYQHMLVCLDTG-KLEFPTPSGRYP 67
           IPINYP SIDDGCGSP Y+HML+C D   KLE  TPSG+YP
Sbjct: 38  IPINYPFSIDDGCGSPYYRHMLICSDNDTKLELRTPSGKYP 78



 Score = 47.4 bits (111), Expect(2) = 1e-17
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -2

Query: 67  PVQNISYSDPHILVSDPFMWKC 2
           PV++ISYSDPH+LVSDPFMW C
Sbjct: 78  PVKSISYSDPHLLVSDPFMWNC 99


>ref|XP_003547261.1| PREDICTED: uncharacterized protein LOC100798581 [Glycine max]
          Length = 326

 Score = 67.0 bits (162), Expect(2) = 2e-17
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -3

Query: 186 IPINYPLSIDDGCGSPNYQHMLVCLDTGKLEFPTPSGRYP 67
           IPI YP  IDDGCGSP Y+H+L C ++GKLE  TPSGRYP
Sbjct: 38  IPIKYPFGIDDGCGSPYYRHILQCSNSGKLELRTPSGRYP 77



 Score = 46.6 bits (109), Expect(2) = 2e-17
 Identities = 16/22 (72%), Positives = 21/22 (95%)
 Frame = -2

Query: 67  PVQNISYSDPHILVSDPFMWKC 2
           PV+N+SYSDPH++V+DPFMW C
Sbjct: 77  PVRNLSYSDPHVVVTDPFMWSC 98


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