BLASTX nr result

ID: Coptis21_contig00033802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033802
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331080.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002527837.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|NP_001237847.1| uncharacterized protein LOC100527815 [Glycin...    56   3e-06

>ref|XP_002331080.1| predicted protein [Populus trichocarpa] gi|222872808|gb|EEF09939.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   GNSSLGQTISEGHIV--HEEIVSEITPLCPSFPTSSTPSYQHYMVTSPVYGVPVAPATQT 174
           G  SL +     HI    +EIV E TP+ P+ P     SYQ Y+V +PVYGVPV    + 
Sbjct: 71  GLLSLPELAHPSHIQVPSQEIVMETTPIYPTLP-----SYQQYLVPNPVYGVPVEQKPRR 125

Query: 175 EKFGGVFGCAVSVGANLIRCFCPCFHFRQRRC*NIIVIT 291
           EK  G FGC V+  ANLIRCFCPCF  +++   +I+ IT
Sbjct: 126 EKSTGFFGCVVTFCANLIRCFCPCFRIQEK---SILAIT 161


>ref|XP_002527837.1| conserved hypothetical protein [Ricinus communis]
           gi|223532761|gb|EEF34540.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
 Frame = +1

Query: 49  EEIVSEI--TPLCPSFPTSSTP-SYQHYMVTSPVYGVPVAPAT-QTEKFGGVFGCAVSVG 216
           +EIV E     + P+ P + TP +YQ Y V +PVYGVPV   T + E+  G FGC V  G
Sbjct: 86  QEIVVETDTNAIYPTLPNTDTPLTYQQYAVPNPVYGVPVVEQTPRRERSAGFFGCFVKFG 145

Query: 217 ANLIRCFCPCFHFRQ 261
           ANLIRCFCPCFH R+
Sbjct: 146 ANLIRCFCPCFHIRE 160


>ref|NP_001237847.1| uncharacterized protein LOC100527815 [Glycine max]
           gi|255633270|gb|ACU16991.1| unknown [Glycine max]
          Length = 144

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
 Frame = +1

Query: 82  PSFPTSSTPSYQHYMVT--SPVYG--VPVAPATQTEKFGGVFGCAVSVGANLIRCFCPCF 249
           P    S   SYQ YMV+   PVYG  VPV  A++TE+  G FGC  S G+ L RC  PC 
Sbjct: 79  PQEIASLNSSYQQYMVSVSEPVYGIPVPVIHASRTERSAGQFGCLFSFGSYLFRCLFPCS 138

Query: 250 HFRQ 261
           + RQ
Sbjct: 139 YIRQ 142


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