BLASTX nr result

ID: Coptis21_contig00033793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033793
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28490.3| unnamed protein product [Vitis vinifera]               58   2e-06

>emb|CBI28490.3| unnamed protein product [Vitis vinifera]
          Length = 566

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 8/179 (4%)
 Frame = -1

Query: 513 LYSGDQESVPLSQRFCQPRHQETNSKKGVSEMGEGIRENEPHR--HSEVNVGLETSKSHC 340
           L  G +    +++     R +E   +    E    I   +P    H +VN+G     S C
Sbjct: 369 LTKGKKVDAKMTEENLGRREEEEQMQPQAQETTTAIPGGDPASLVHEKVNIGFRIIDS-C 427

Query: 339 KSTESANPFLGFGYKRQKN------VDTLHKPKLSSEINVGQAETAVNHNEDKIVSRKSV 178
           +   +         +R KN      VD+  + K S +++    + A +  ++ IVS KS+
Sbjct: 428 RGARTLLTHQRHVGQRAKNKMVSQNVDS--QKKSSPDLHNNAEKNAGDGTKEVIVSSKSI 485

Query: 177 RYSRSTKYSSNPAIPDSRRKKLPWSHXXXXXXXEAVKIFSVKCRQNLSWRNILEYGCHV 1
           +    +K  +N   P+ RRKKL W         E V+ FS    +NL WR ILE+G HV
Sbjct: 486 QPRGPSKQLTNQIFPNERRKKLLWKTDEEEMLKEGVQKFSATGDKNLPWRKILEFGRHV 544


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