BLASTX nr result

ID: Coptis21_contig00033772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033772
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [S...   149   2e-34
ref|XP_002445504.1| hypothetical protein SORBIDRAFT_07g020600 [S...   145   4e-33
ref|XP_002453068.1| hypothetical protein SORBIDRAFT_04g037770 [S...   142   4e-32
ref|XP_002444604.1| hypothetical protein SORBIDRAFT_07g024540 [S...   141   5e-32
ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [S...   141   5e-32

>ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [Sorghum bicolor]
           gi|241934813|gb|EES07958.1| hypothetical protein
           SORBIDRAFT_05g002670 [Sorghum bicolor]
          Length = 1193

 Score =  149 bits (376), Expect = 2e-34
 Identities = 67/92 (72%), Positives = 79/92 (85%)
 Frame = -1

Query: 276 PRDMHQRYYDAMTLVQKFGKPDLFITMTCNPNWDEIRENLYQGQTPQDRPEVVVRAFHAK 97
           PRDM +RY DAM LV++FGKPD+F+TMTCNPNWDEI+  LY GQTPQDRP++VVR F AK
Sbjct: 277 PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPNWDEIKRELYPGQTPQDRPDLVVRVFRAK 336

Query: 96  FEELKNDLFTKNILGKVVAHVHVIEFQKRGLP 1
            +ELK+ L  KNILGKV AHV+V+EFQKRGLP
Sbjct: 337 LQELKDRLLKKNILGKVRAHVYVVEFQKRGLP 368


>ref|XP_002445504.1| hypothetical protein SORBIDRAFT_07g020600 [Sorghum bicolor]
           gi|241941854|gb|EES14999.1| hypothetical protein
           SORBIDRAFT_07g020600 [Sorghum bicolor]
          Length = 1028

 Score =  145 bits (365), Expect = 4e-33
 Identities = 65/92 (70%), Positives = 78/92 (84%)
 Frame = -1

Query: 276 PRDMHQRYYDAMTLVQKFGKPDLFITMTCNPNWDEIRENLYQGQTPQDRPEVVVRAFHAK 97
           PRDM +RY DAM LV++FGKPD+F+TMTCNPNWDEI+  LY GQ PQDRP++VVR F AK
Sbjct: 9   PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPNWDEIKRELYPGQMPQDRPDLVVRVFRAK 68

Query: 96  FEELKNDLFTKNILGKVVAHVHVIEFQKRGLP 1
            +ELK+ L  K+ILGKV AHV+V+EFQKRGLP
Sbjct: 69  LQELKDRLLKKDILGKVRAHVYVVEFQKRGLP 100


>ref|XP_002453068.1| hypothetical protein SORBIDRAFT_04g037770 [Sorghum bicolor]
           gi|241932899|gb|EES06044.1| hypothetical protein
           SORBIDRAFT_04g037770 [Sorghum bicolor]
          Length = 1275

 Score =  142 bits (357), Expect = 4e-32
 Identities = 64/92 (69%), Positives = 76/92 (82%)
 Frame = -1

Query: 276 PRDMHQRYYDAMTLVQKFGKPDLFITMTCNPNWDEIRENLYQGQTPQDRPEVVVRAFHAK 97
           PRDM +RY DAM LV++FGKPD+F+TMTCNP WDEI   LY GQTPQDRP+++ R F AK
Sbjct: 666 PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPKWDEITRELYPGQTPQDRPDLIDRVFRAK 725

Query: 96  FEELKNDLFTKNILGKVVAHVHVIEFQKRGLP 1
            EELK+ L  K+ILGKV AHV+V+EFQKRGLP
Sbjct: 726 LEELKHRLLKKDILGKVRAHVYVVEFQKRGLP 757


>ref|XP_002444604.1| hypothetical protein SORBIDRAFT_07g024540 [Sorghum bicolor]
           gi|241940954|gb|EES14099.1| hypothetical protein
           SORBIDRAFT_07g024540 [Sorghum bicolor]
          Length = 1185

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/92 (69%), Positives = 77/92 (83%)
 Frame = -1

Query: 276 PRDMHQRYYDAMTLVQKFGKPDLFITMTCNPNWDEIRENLYQGQTPQDRPEVVVRAFHAK 97
           PRDM +RY DAM LV++FGKPD+F+TMTCNPNWDEI+  LY  Q PQDRP++VVR F AK
Sbjct: 268 PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPNWDEIKRELYPVQMPQDRPDLVVRVFRAK 327

Query: 96  FEELKNDLFTKNILGKVVAHVHVIEFQKRGLP 1
            +ELK+ L  K+ILGKV AHV+V+EFQKRGLP
Sbjct: 328 LQELKDRLLKKDILGKVRAHVYVVEFQKRGLP 359


>ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [Sorghum bicolor]
           gi|241937278|gb|EES10423.1| hypothetical protein
           SORBIDRAFT_06g001660 [Sorghum bicolor]
          Length = 1484

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/92 (69%), Positives = 76/92 (82%)
 Frame = -1

Query: 276 PRDMHQRYYDAMTLVQKFGKPDLFITMTCNPNWDEIRENLYQGQTPQDRPEVVVRAFHAK 97
           PRDM +RY DAM LV++FGKPD+F+TMTCNP WDEI   LY GQTPQDRP+++ R F AK
Sbjct: 468 PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPKWDEITRELYPGQTPQDRPDLIDRVFRAK 527

Query: 96  FEELKNDLFTKNILGKVVAHVHVIEFQKRGLP 1
            EELK+ L  K+ILGKV AHV+V+EFQKRGLP
Sbjct: 528 LEELKHMLLKKDILGKVRAHVYVVEFQKRGLP 559


Top