BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033771
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ86307.1| unknown [Medicago truncatula]                           66   3e-09
ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...    59   3e-07
ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...    59   4e-07
emb|CBI24913.3| unnamed protein product [Vitis vinifera]               59   4e-07
gb|AFK41814.1| unknown [Lotus japonicus]                               59   5e-07

>gb|ACJ86307.1| unknown [Medicago truncatula]
          Length = 432

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/55 (60%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
 Frame = -3

Query: 158 SNHQRMSFQFSRTFCSQTKKQYPKHA---RQYFPPWFSVAPMMDWTDNHYRTLAR 3
           S   R +   SR F S  ++ Y KH    +QY PPWFSVAPMMDWTDNHYRTLAR
Sbjct: 34  SRRSRRNLCSSRVF-SVKQQSYHKHGVLGKQYLPPWFSVAPMMDWTDNHYRTLAR 87


>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 12/63 (19%)
 Frame = -3

Query: 155 NHQRMSFQ--FSRTFCSQTKKQY-PKH---------ARQYFPPWFSVAPMMDWTDNHYRT 12
           NH+R+S    +  +  S+    Y  KH         A QY PPWFSVAPMMDWT+NHYRT
Sbjct: 23  NHRRLSLNILYGNSAKSKNSTAYIRKHQLHTKVVMVAGQYLPPWFSVAPMMDWTNNHYRT 82

Query: 11  LAR 3
           LAR
Sbjct: 83  LAR 85


>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
          vinifera]
          Length = 377

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -3

Query: 83 ARQYFPPWFSVAPMMDWTDNHYRTLAR 3
          A QY PPWFSVAPMMDWT+NHYRTLAR
Sbjct: 3  AGQYLPPWFSVAPMMDWTNNHYRTLAR 29


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -3

Query: 83  ARQYFPPWFSVAPMMDWTDNHYRTLAR 3
           A QY PPWFSVAPMMDWT+NHYRTLAR
Sbjct: 49  AGQYLPPWFSVAPMMDWTNNHYRTLAR 75


>gb|AFK41814.1| unknown [Lotus japonicus]
          Length = 425

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
 Frame = -3

Query: 176 GSLLTTSN---HQRMSFQFSRTFCSQTKKQYPKHA--RQYFPPWFSVAPMMDWTDNHYRT 12
           GS +  +N   H   +F+ S  F S  ++ + K      Y PPWFSVAPMM+WTD+HYRT
Sbjct: 17  GSTVIRNNCRFHVGRNFRSSSRFFSAKQQSHDKGVLPNYYLPPWFSVAPMMEWTDHHYRT 76

Query: 11  LAR 3
           LAR
Sbjct: 77  LAR 79