BLASTX nr result
ID: Coptis21_contig00033767
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00033767 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi... 162 3e-38 emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera] 162 3e-38 ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2... 142 2e-32 ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi... 142 3e-32 ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group] g... 138 5e-31 >ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230 [Vitis vinifera] Length = 758 Score = 162 bits (409), Expect = 3e-38 Identities = 78/98 (79%), Positives = 85/98 (86%), Gaps = 3/98 (3%) Frame = -1 Query: 285 ACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRVRGV 106 ACVWGALLSSCRVH NVSLGEVAA +LFELEP+N GNY+LLSNIYA+KGMW EVNRVR + Sbjct: 555 ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDM 614 Query: 105 NR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQII 1 + LRKNPGCSWIEVKNKV LLAGD+SHP M QII Sbjct: 615 MKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQII 652 >emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera] Length = 760 Score = 162 bits (409), Expect = 3e-38 Identities = 78/98 (79%), Positives = 85/98 (86%), Gaps = 3/98 (3%) Frame = -1 Query: 285 ACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRVRGV 106 ACVWGALLSSCRVH NVSLGEVAA +LFELEP+N GNY+LLSNIYA+KGMW EVNRVR + Sbjct: 555 ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDM 614 Query: 105 NR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQII 1 + LRKNPGCSWIEVKNKV LLAGD+SHP M QII Sbjct: 615 MKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQII 652 >ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa] Length = 716 Score = 142 bits (359), Expect = 2e-32 Identities = 69/101 (68%), Positives = 79/101 (78%), Gaps = 3/101 (2%) Frame = -1 Query: 294 ETGACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRV 115 E +CVWGALLSSCRVH V LGE+AA ++FELEP N GNY+LLSNIYA+K MW EV+ V Sbjct: 510 EPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMV 569 Query: 114 RGVNR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQII 1 R + R L+KNPG SWIE+KNKV LLAGD SHP M QII Sbjct: 570 RDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQII 610 >ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like [Glycine max] Length = 748 Score = 142 bits (358), Expect = 3e-32 Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 3/101 (2%) Frame = -1 Query: 294 ETGACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRV 115 E ACVWGALLSSCRVH N+SLGE+AA +LF LEP N GNY+LLSNIYA+KG+W E NR+ Sbjct: 542 EPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRI 601 Query: 114 RGVNR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQII 1 R V + LRKNPG SWIEV +KV LLAGD+SHP M I+ Sbjct: 602 REVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDIL 642 >ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group] gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group] gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group] Length = 664 Score = 138 bits (347), Expect = 5e-31 Identities = 67/100 (67%), Positives = 76/100 (76%), Gaps = 3/100 (3%) Frame = -1 Query: 294 ETGACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRV 115 E C+WG+LL SCRVHGNV L EVAA LF+LEP NAGNYVLLSNIYA+K MW VNR+ Sbjct: 458 EPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRL 517 Query: 114 RGVNR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQI 4 R + + L+K GCSWIE+KNKV LLAGD SHP MA I Sbjct: 518 RDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAI 557