BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033767
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   162   3e-38
ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group] g...   138   5e-31

>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/98 (79%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
 Frame = -1

Query: 285 ACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRVRGV 106
           ACVWGALLSSCRVH NVSLGEVAA +LFELEP+N GNY+LLSNIYA+KGMW EVNRVR +
Sbjct: 555 ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDM 614

Query: 105 NR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQII 1
            +   LRKNPGCSWIEVKNKV  LLAGD+SHP M QII
Sbjct: 615 MKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQII 652


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/98 (79%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
 Frame = -1

Query: 285 ACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRVRGV 106
           ACVWGALLSSCRVH NVSLGEVAA +LFELEP+N GNY+LLSNIYA+KGMW EVNRVR +
Sbjct: 555 ACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDM 614

Query: 105 NR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQII 1
            +   LRKNPGCSWIEVKNKV  LLAGD+SHP M QII
Sbjct: 615 MKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQII 652


>ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/101 (68%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
 Frame = -1

Query: 294 ETGACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRV 115
           E  +CVWGALLSSCRVH  V LGE+AA ++FELEP N GNY+LLSNIYA+K MW EV+ V
Sbjct: 510 EPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMV 569

Query: 114 RGVNR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQII 1
           R + R   L+KNPG SWIE+KNKV  LLAGD SHP M QII
Sbjct: 570 RDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQII 610


>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  142 bits (358), Expect = 3e-32
 Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 3/101 (2%)
 Frame = -1

Query: 294 ETGACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRV 115
           E  ACVWGALLSSCRVH N+SLGE+AA +LF LEP N GNY+LLSNIYA+KG+W E NR+
Sbjct: 542 EPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRI 601

Query: 114 RGVNR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQII 1
           R V +   LRKNPG SWIEV +KV  LLAGD+SHP M  I+
Sbjct: 602 REVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDIL 642


>ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
           gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578900|dbj|BAF17263.1|
           Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/100 (67%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
 Frame = -1

Query: 294 ETGACVWGALLSSCRVHGNVSLGEVAANQLFELEPNNAGNYVLLSNIYAAKGMWKEVNRV 115
           E   C+WG+LL SCRVHGNV L EVAA  LF+LEP NAGNYVLLSNIYA+K MW  VNR+
Sbjct: 458 EPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRL 517

Query: 114 RGVNR---LRKNPGCSWIEVKNKVRTLLAGDRSHPNMAQI 4
           R + +   L+K  GCSWIE+KNKV  LLAGD SHP MA I
Sbjct: 518 RDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAI 557