BLASTX nr result

ID: Coptis21_contig00033756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033756
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140742.1| PREDICTED: uncharacterized protein LOC101208...   104   6e-21
ref|XP_002301718.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|NP_198622.1| uncharacterized protein [Arabidopsis thaliana] ...    99   3e-19
ref|XP_002532639.1| conserved hypothetical protein [Ricinus comm...    98   6e-19
ref|XP_002870875.1| predicted protein [Arabidopsis lyrata subsp....    97   1e-18

>ref|XP_004140742.1| PREDICTED: uncharacterized protein LOC101208221 [Cucumis sativus]
           gi|449518314|ref|XP_004166187.1| PREDICTED:
           uncharacterized LOC101208221 [Cucumis sativus]
          Length = 137

 Score =  104 bits (260), Expect = 6e-21
 Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 12/90 (13%)
 Frame = -3

Query: 235 ASKPIIQIH---------AFGKTKKTHS---QVIIIRCTNNNNSKQCLKTCKNCKTQFDP 92
           +S P I +H         A  +T K  S   +++ IRC+ N+N++  L+TC+NCK QFDP
Sbjct: 10  SSAPFISLHSKFLVLRSDALNRTSKLSSNSPKILTIRCSANSNNQLTLRTCRNCKAQFDP 69

Query: 91  SLNNPNACRFHTSHFGGETKRKFESVYSGG 2
           SLN+P ACRFHTSHFGGETKRKFESV+SGG
Sbjct: 70  SLNHPRACRFHTSHFGGETKRKFESVHSGG 99


>ref|XP_002301718.1| predicted protein [Populus trichocarpa] gi|222843444|gb|EEE80991.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score =  101 bits (251), Expect = 7e-20
 Identities = 44/71 (61%), Positives = 55/71 (77%)
 Frame = -3

Query: 214 IHAFGKTKKTHSQVIIIRCTNNNNSKQCLKTCKNCKTQFDPSLNNPNACRFHTSHFGGET 35
           + ++ K      ++ I  C+ N N+ + L+TCKNCKTQFDPSLN+P ACRFHTSHFGGET
Sbjct: 24  LQSYQKLTIESQRLPITHCSINQNNNKTLRTCKNCKTQFDPSLNHPRACRFHTSHFGGET 83

Query: 34  KRKFESVYSGG 2
           KRKFESVY+GG
Sbjct: 84  KRKFESVYTGG 94


>ref|NP_198622.1| uncharacterized protein [Arabidopsis thaliana]
           gi|61742751|gb|AAX55196.1| hypothetical protein
           At5g38060 [Arabidopsis thaliana]
           gi|71905567|gb|AAZ52761.1| expressed protein
           [Arabidopsis thaliana] gi|332006879|gb|AED94262.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 134

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/79 (59%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
 Frame = -3

Query: 229 KPIIQIHAFG--KTKKTHSQVIIIRCT-NNNNSKQCLKTCKNCKTQFDPSLNNPNACRFH 59
           K +I  H+    KT K +S+    +CT ++++  + L+TCKNCKTQFDP LNNP ACRFH
Sbjct: 19  KTLIHSHSLKTLKTPKLNSRQFFSQCTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFH 78

Query: 58  TSHFGGETKRKFESVYSGG 2
           T+HFGGETKRKFESVY+GG
Sbjct: 79  TAHFGGETKRKFESVYTGG 97


>ref|XP_002532639.1| conserved hypothetical protein [Ricinus communis]
           gi|223527630|gb|EEF29742.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 137

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/56 (80%), Positives = 51/56 (91%)
 Frame = -3

Query: 169 IIRCTNNNNSKQCLKTCKNCKTQFDPSLNNPNACRFHTSHFGGETKRKFESVYSGG 2
           II+C+ +N SK  L+TCKNCKTQFDPSLN+P ACRFHT+HFGGETKRKFESVYSGG
Sbjct: 46  IIQCSIDN-SKNTLRTCKNCKTQFDPSLNHPLACRFHTAHFGGETKRKFESVYSGG 100


>ref|XP_002870875.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316711|gb|EFH47134.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 133

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/79 (55%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
 Frame = -3

Query: 229 KPIIQIHAFG--KTKKTHSQVIIIRCT-NNNNSKQCLKTCKNCKTQFDPSLNNPNACRFH 59
           K +I  H+    K  K +S+  +++C+ ++++  + L+TCKNCKTQFDP LNNP ACRFH
Sbjct: 18  KTLIHSHSLKTLKNPKLNSRKFLLQCSVSSSDGPKTLRTCKNCKTQFDPLLNNPRACRFH 77

Query: 58  TSHFGGETKRKFESVYSGG 2
           T+H+GGETKRKFESVY+GG
Sbjct: 78  TAHYGGETKRKFESVYTGG 96


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