BLASTX nr result

ID: Coptis21_contig00033755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033755
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548897.1| PREDICTED: sex determination protein tassels...   156   2e-36
ref|XP_002321085.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
gb|ACU23760.1| unknown [Glycine max]                                  153   2e-35
ref|XP_002512852.1| short chain alcohol dehydrogenase, putative ...   153   2e-35
ref|XP_003624486.1| Sex determination protein tasselseed-2 [Medi...   147   1e-33

>ref|XP_003548897.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine
           max]
          Length = 301

 Score =  156 bits (395), Expect = 2e-36
 Identities = 74/101 (73%), Positives = 87/101 (86%)
 Frame = +3

Query: 261 VGGGRLEGKVALITGGASGLGKVTAHEFIQEGANVIIADINTELGQQTAEELGPEAHFVT 440
           VGG RLEGKVALITG ASGLGK TAHEF+Q GA VIIAD +T+LG Q A+ELGP AH+  
Sbjct: 30  VGGRRLEGKVALITGSASGLGKATAHEFVQHGAQVIIADNDTKLGPQVAKELGPSAHYTE 89

Query: 441 CDVTVESQVAEAVDIAMAHHGKLDVMYNNAGITGPLFPPSV 563
           CDVTVE+QVA+AV++A+AH+GKLD+MYNNAGI GP  PPS+
Sbjct: 90  CDVTVEAQVADAVNVAVAHYGKLDIMYNNAGIPGPSIPPSI 130


>ref|XP_002321085.1| predicted protein [Populus trichocarpa] gi|222861858|gb|EEE99400.1|
           predicted protein [Populus trichocarpa]
          Length = 285

 Score =  156 bits (395), Expect = 2e-36
 Identities = 73/100 (73%), Positives = 86/100 (86%)
 Frame = +3

Query: 267 GGRLEGKVALITGGASGLGKVTAHEFIQEGANVIIADINTELGQQTAEELGPEAHFVTCD 446
           G +LEGKVALITGGASG+GK TAHEFI+ GA VIIAD+++E+G Q A ELGP AHFV CD
Sbjct: 16  GSKLEGKVALITGGASGIGKTTAHEFIKHGARVIIADVDSEIGPQAANELGPAAHFVQCD 75

Query: 447 VTVESQVAEAVDIAMAHHGKLDVMYNNAGITGPLFPPSVA 566
           VT E+QV +AV IA+ +HGKLD+MYNNAGITGP FPPS+A
Sbjct: 76  VTAEAQVEKAVGIALTNHGKLDIMYNNAGITGPSFPPSIA 115


>gb|ACU23760.1| unknown [Glycine max]
          Length = 303

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/107 (68%), Positives = 88/107 (82%)
 Frame = +3

Query: 243 FASKSGVGGGRLEGKVALITGGASGLGKVTAHEFIQEGANVIIADINTELGQQTAEELGP 422
           +A+  G    RLEGKVALITG ASGLGK TAHEF+Q GA VIIAD +T+LG Q A+ELGP
Sbjct: 26  YATTVGGRSDRLEGKVALITGSASGLGKATAHEFVQHGAQVIIADNDTKLGPQVAKELGP 85

Query: 423 EAHFVTCDVTVESQVAEAVDIAMAHHGKLDVMYNNAGITGPLFPPSV 563
            AH+  CDVTVE+QVA+AV++A+AH+GKLD+MYNNAGI GP  PPS+
Sbjct: 86  SAHYTECDVTVEAQVADAVNVAVAHYGKLDIMYNNAGIPGPSIPPSI 132


>ref|XP_002512852.1| short chain alcohol dehydrogenase, putative [Ricinus communis]
           gi|223547863|gb|EEF49355.1| short chain alcohol
           dehydrogenase, putative [Ricinus communis]
          Length = 302

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/114 (65%), Positives = 90/114 (78%)
 Frame = +3

Query: 225 KHGTANFASKSGVGGGRLEGKVALITGGASGLGKVTAHEFIQEGANVIIADINTELGQQT 404
           KH   ++++ +G    RLEGKVALITGGASGLG  TAH+FIQ GA VIIAD++++LGQQ 
Sbjct: 20  KHAIRSYSTATGAAR-RLEGKVALITGGASGLGNATAHQFIQHGARVIIADVDSKLGQQV 78

Query: 405 AEELGPEAHFVTCDVTVESQVAEAVDIAMAHHGKLDVMYNNAGITGPLFPPSVA 566
           A ELG  AHFV CDVTVE+QV +AV+ AM  HGKLD+MYNNAGI GP  PPS+A
Sbjct: 79  ATELGSAAHFVRCDVTVEAQVKDAVEAAMGRHGKLDIMYNNAGIPGPSVPPSIA 132


>ref|XP_003624486.1| Sex determination protein tasselseed-2 [Medicago truncatula]
           gi|87240694|gb|ABD32552.1| Short-chain
           dehydrogenase/reductase SDR [Medicago truncatula]
           gi|355499501|gb|AES80704.1| Sex determination protein
           tasselseed-2 [Medicago truncatula]
           gi|388513175|gb|AFK44649.1| unknown [Medicago
           truncatula]
          Length = 301

 Score =  147 bits (371), Expect = 1e-33
 Identities = 76/137 (55%), Positives = 97/137 (70%)
 Frame = +3

Query: 153 MLRSLASRVRDLRGLVAAATFKEGKHGTANFASKSGVGGGRLEGKVALITGGASGLGKVT 332
           MLR+LA  ++          F  G     +    + VGG RLEGK+A+ITG ASGLGK T
Sbjct: 1   MLRTLARELK-------LTNFSNGLVKKRSSRFYATVGGRRLEGKIAIITGSASGLGKAT 53

Query: 333 AHEFIQEGANVIIADINTELGQQTAEELGPEAHFVTCDVTVESQVAEAVDIAMAHHGKLD 512
           AHEF+Q GA VIIAD +T+LG + A+ELG  A +V CDVTVE+QV EAV+ A+ ++GKLD
Sbjct: 54  AHEFVQHGAQVIIADNDTQLGPKVAKELGHSAQYVECDVTVEAQVEEAVNFAITNYGKLD 113

Query: 513 VMYNNAGITGPLFPPSV 563
           +MYNNAGITGP+ PPS+
Sbjct: 114 IMYNNAGITGPVIPPSI 130


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