BLASTX nr result

ID: Coptis21_contig00033752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033752
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269011.2| PREDICTED: soluble starch synthase 3, chloro...   221   6e-56
emb|CBI23240.3| unnamed protein product [Vitis vinifera]              221   6e-56
sp|Q43846.1|SSY3_SOLTU RecName: Full=Soluble starch synthase 3, ...   220   8e-56
gb|ACT83376.1| soluble starch synthase [Solanum tuberosum]            220   8e-56
emb|CAA64173.1| soluble-starch-synthase [Solanum tuberosum]           220   8e-56

>ref|XP_002269011.2| PREDICTED: soluble starch synthase 3, chloroplastic/amyloplastic-like
            [Vitis vinifera]
          Length = 1177

 Score =  221 bits (562), Expect = 6e-56
 Identities = 103/112 (91%), Positives = 106/112 (94%)
 Frame = +1

Query: 1    VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAHAQALEPNGFNFDGVD 180
            VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERA AQ LEPNGFNFDG D
Sbjct: 1066 VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQAQGLEPNGFNFDGAD 1125

Query: 181  AGGVDYALNRAISAWYDGREWFNSLRKQVMEQDWSWNRPALDYMELYYAARK 336
              GVDYALNRAISAWYDGR+WFNSL K+VMEQDWSWNRPALDYMELY+AARK
Sbjct: 1126 PVGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHAARK 1177


>emb|CBI23240.3| unnamed protein product [Vitis vinifera]
          Length = 1046

 Score =  221 bits (562), Expect = 6e-56
 Identities = 103/112 (91%), Positives = 106/112 (94%)
 Frame = +1

Query: 1    VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAHAQALEPNGFNFDGVD 180
            VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERA AQ LEPNGFNFDG D
Sbjct: 935  VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQAQGLEPNGFNFDGAD 994

Query: 181  AGGVDYALNRAISAWYDGREWFNSLRKQVMEQDWSWNRPALDYMELYYAARK 336
              GVDYALNRAISAWYDGR+WFNSL K+VMEQDWSWNRPALDYMELY+AARK
Sbjct: 995  PVGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHAARK 1046


>sp|Q43846.1|SSY3_SOLTU RecName: Full=Soluble starch synthase 3, chloroplastic/amyloplastic;
            AltName: Full=Soluble starch synthase III; Short=SS III;
            Flags: Precursor gi|1200154|emb|CAA65065.1| glycogen
            (starch) synthase [Solanum tuberosum]
          Length = 1230

 Score =  220 bits (561), Expect = 8e-56
 Identities = 102/113 (90%), Positives = 107/113 (94%)
 Frame = +1

Query: 1    VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAHAQALEPNGFNFDGVD 180
            VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERA    LEPNGF+FDG D
Sbjct: 1117 VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGAD 1176

Query: 181  AGGVDYALNRAISAWYDGREWFNSLRKQVMEQDWSWNRPALDYMELYYAARKL 339
            AGGVDYALNRA+SAWYDGR+WFNSL KQVMEQDWSWNRPALDY+ELY+AARKL
Sbjct: 1177 AGGVDYALNRALSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLELYHAARKL 1229


>gb|ACT83376.1| soluble starch synthase [Solanum tuberosum]
          Length = 1230

 Score =  220 bits (561), Expect = 8e-56
 Identities = 102/113 (90%), Positives = 107/113 (94%)
 Frame = +1

Query: 1    VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAHAQALEPNGFNFDGVD 180
            VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERA    LEPNGF+FDG D
Sbjct: 1117 VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGAD 1176

Query: 181  AGGVDYALNRAISAWYDGREWFNSLRKQVMEQDWSWNRPALDYMELYYAARKL 339
            AGGVDYALNRA+SAWYDGR+WFNSL KQVMEQDWSWNRPALDY+ELY+AARKL
Sbjct: 1177 AGGVDYALNRALSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLELYHAARKL 1229


>emb|CAA64173.1| soluble-starch-synthase [Solanum tuberosum]
          Length = 1230

 Score =  220 bits (561), Expect = 8e-56
 Identities = 102/113 (90%), Positives = 107/113 (94%)
 Frame = +1

Query: 1    VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAHAQALEPNGFNFDGVD 180
            VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERA    LEPNGF+FDG D
Sbjct: 1117 VPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGAD 1176

Query: 181  AGGVDYALNRAISAWYDGREWFNSLRKQVMEQDWSWNRPALDYMELYYAARKL 339
            AGGVDYALNRA+SAWYDGR+WFNSL KQVMEQDWSWNRPALDY+ELY+AARKL
Sbjct: 1177 AGGVDYALNRALSAWYDGRDWFNSLCKQVMEQDWSWNRPALDYLELYHAARKL 1229


Top