BLASTX nr result

ID: Coptis21_contig00033737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033737
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280019.1| PREDICTED: uncharacterized protein LOC100262...   158   4e-37
emb|CBI37643.3| unnamed protein product [Vitis vinifera]              158   4e-37
ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
emb|CAN62018.1| hypothetical protein VITISV_008855 [Vitis vinifera]   148   5e-34
ref|XP_002521721.1| conserved hypothetical protein [Ricinus comm...   144   7e-33

>ref|XP_002280019.1| PREDICTED: uncharacterized protein LOC100262676 [Vitis vinifera]
          Length = 1053

 Score =  158 bits (400), Expect = 4e-37
 Identities = 86/149 (57%), Positives = 106/149 (71%), Gaps = 2/149 (1%)
 Frame = +1

Query: 25   DELSNIFSIPNFPLDKEIRXXXXXXXXXXXXLNIDDINIED--ENPKGHNMIAVLNKKKL 198
            +ELS+IFS+ NFPL    +            L+IDDI++ED  E PKG NM+A LNK+KL
Sbjct: 894  EELSSIFSVANFPLYAG-KGDNLDMDEEEVELDIDDIDLEDPGEKPKGQNMMAALNKQKL 952

Query: 199  TSKFLAIKGKLKQKMIRNEKGSAKPAHEDENGDTVDQIKKKYGFSSSGDSSVAKLTENKL 378
            TSKF A+KGKLK   ++NEK S K   +DE    VDQIKKKYGF  SG+SSV K+ E+KL
Sbjct: 953  TSKFQALKGKLKHVKLKNEKSSTKEEPQDEKAGAVDQIKKKYGFPISGESSVIKMAESKL 1012

Query: 379  HENITKLQGINIRATEMQSTAQSFSAMAK 465
            +EN+ KLQGINI+ TEMQ TA+SFS MAK
Sbjct: 1013 NENLKKLQGINIKTTEMQDTAKSFSFMAK 1041


>emb|CBI37643.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  158 bits (400), Expect = 4e-37
 Identities = 86/149 (57%), Positives = 106/149 (71%), Gaps = 2/149 (1%)
 Frame = +1

Query: 25   DELSNIFSIPNFPLDKEIRXXXXXXXXXXXXLNIDDINIED--ENPKGHNMIAVLNKKKL 198
            +ELS+IFS+ NFPL    +            L+IDDI++ED  E PKG NM+A LNK+KL
Sbjct: 895  EELSSIFSVANFPLYAG-KGDNLDMDEEEVELDIDDIDLEDPGEKPKGQNMMAALNKQKL 953

Query: 199  TSKFLAIKGKLKQKMIRNEKGSAKPAHEDENGDTVDQIKKKYGFSSSGDSSVAKLTENKL 378
            TSKF A+KGKLK   ++NEK S K   +DE    VDQIKKKYGF  SG+SSV K+ E+KL
Sbjct: 954  TSKFQALKGKLKHVKLKNEKSSTKEEPQDEKAGAVDQIKKKYGFPISGESSVIKMAESKL 1013

Query: 379  HENITKLQGINIRATEMQSTAQSFSAMAK 465
            +EN+ KLQGINI+ TEMQ TA+SFS MAK
Sbjct: 1014 NENLKKLQGINIKTTEMQDTAKSFSFMAK 1042


>ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|222856664|gb|EEE94211.1|
            predicted protein [Populus trichocarpa]
          Length = 890

 Score =  148 bits (374), Expect = 4e-34
 Identities = 83/154 (53%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
 Frame = +1

Query: 10   TANIADELSNIFSIPNFPLDKEIRXXXXXXXXXXXXLNIDDINIED--ENPKGHNMIAVL 183
            T    +ELS IFS  NF    +              L+IDDI+++D  E  K  N++A L
Sbjct: 725  TRESIEELSKIFSTVNFECHHDENKDSMAMDDDGIDLDIDDIDLDDPVEKTKDQNLLAAL 784

Query: 184  NKKKLTSKFLAIKGKLKQKMIRNEKGSAKPAHEDENGDTVDQIKKKYGFSSSGDSSVAKL 363
            NKKKL SKF A  G++KQ  ++NEK + K   +DE    VDQIKKKYGFS SG+SS AK+
Sbjct: 785  NKKKLASKFQAFTGRIKQMNVKNEK-NIKEEVKDEKTGAVDQIKKKYGFSLSGESSAAKI 843

Query: 364  TENKLHENITKLQGINIRATEMQSTAQSFSAMAK 465
             +NKLHENI KLQGIN+RATEMQ TA SFSAMAK
Sbjct: 844  AQNKLHENIRKLQGINLRATEMQETASSFSAMAK 877


>emb|CAN62018.1| hypothetical protein VITISV_008855 [Vitis vinifera]
          Length = 137

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/118 (64%), Positives = 92/118 (77%), Gaps = 2/118 (1%)
 Frame = +1

Query: 118 LNIDDINIED--ENPKGHNMIAVLNKKKLTSKFLAIKGKLKQKMIRNEKGSAKPAHEDEN 291
           L+IDDI++ED  E PKG NM+A LNK+KLTSKF A+KGKLK   ++NEK S K   +DE 
Sbjct: 8   LDIDDIDLEDPGEKPKGQNMMAALNKQKLTSKFQALKGKLKHVKLKNEKSSTKEEPQDEK 67

Query: 292 GDTVDQIKKKYGFSSSGDSSVAKLTENKLHENITKLQGINIRATEMQSTAQSFSAMAK 465
              VDQIKKKYGF  SG+SSV K+ E+KL+EN+ KLQGINI+ TEMQ TA+SFS MAK
Sbjct: 68  AGAVDQIKKKYGFPISGESSVIKMAESKLNENLKKLQGINIKTTEMQDTAKSFSFMAK 125


>ref|XP_002521721.1| conserved hypothetical protein [Ricinus communis]
            gi|223539112|gb|EEF40708.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 995

 Score =  144 bits (363), Expect = 7e-33
 Identities = 81/154 (52%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
 Frame = +1

Query: 10   TANIADELSNIFSIPNFPLDKEIRXXXXXXXXXXXXLNIDDINIED--ENPKGHNMIAVL 183
            T    +EL  IF+  NF  D E              L+IDDI+++D  E PK HN++A  
Sbjct: 829  TRESIEELPAIFATANFACDVE-DSNNMAVDTDGIDLDIDDIDLDDAEEKPKDHNILAAP 887

Query: 184  NKKKLTSKFLAIKGKLKQKMIRNEKGSAKPAHEDENGDTVDQIKKKYGFSSSGDSSVAKL 363
            NK+KL SKF A  GK+KQ  ++NEK  +K    DE    VDQIKKKYGFSSS +S+ AK+
Sbjct: 888  NKQKLASKFQAFTGKIKQLKVKNEKKISKEEQLDEKAGGVDQIKKKYGFSSSTESTAAKM 947

Query: 364  TENKLHENITKLQGINIRATEMQSTAQSFSAMAK 465
             E+KLHEN+ KLQGIN RATEMQ TA+SFSAMA+
Sbjct: 948  AESKLHENVKKLQGINQRATEMQDTARSFSAMAR 981


Top