BLASTX nr result
ID: Coptis21_contig00033724
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00033724 (245 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002522543.1| pentatricopeptide repeat-containing protein,... 124 8e-27 ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containi... 122 3e-26 emb|CBI30660.3| unnamed protein product [Vitis vinifera] 122 4e-26 ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2... 122 4e-26 ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi... 122 4e-26 >ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223538234|gb|EEF39843.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 530 Score = 124 bits (311), Expect = 8e-27 Identities = 58/79 (73%), Positives = 67/79 (84%) Frame = +1 Query: 7 ACGHAGLVSKGWEIFKSMERDHSIKPRMEHYACMVDLLGRSGSLKEALDFIMGMPLKPNS 186 ACGHAGLVSKG EIF+SMER++S+KP MEHYACMVDLLGR+GSL A +F+MGMP KP+S Sbjct: 390 ACGHAGLVSKGREIFESMEREYSLKPGMEHYACMVDLLGRAGSLNLAWEFVMGMPEKPSS 449 Query: 187 DVWGALLGASRLHNNADMA 243 DVW ALL A LH N +MA Sbjct: 450 DVWAALLSACNLHGNVEMA 468 >ref|XP_004163477.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial-like [Cucumis sativus] Length = 523 Score = 122 bits (306), Expect = 3e-26 Identities = 53/79 (67%), Positives = 67/79 (84%) Frame = +1 Query: 7 ACGHAGLVSKGWEIFKSMERDHSIKPRMEHYACMVDLLGRSGSLKEALDFIMGMPLKPNS 186 AC H GLV +GWEIF+SMERD+S+KP+MEHYACMVDLLGR+GSL +A +F+M MP PNS Sbjct: 383 ACAHGGLVEEGWEIFESMERDYSLKPKMEHYACMVDLLGRAGSLLQAWEFVMQMPETPNS 442 Query: 187 DVWGALLGASRLHNNADMA 243 DVW ALL +++LH N ++A Sbjct: 443 DVWAALLSSAKLHGNVEIA 461 >emb|CBI30660.3| unnamed protein product [Vitis vinifera] Length = 598 Score = 122 bits (305), Expect = 4e-26 Identities = 54/79 (68%), Positives = 67/79 (84%) Frame = +1 Query: 7 ACGHAGLVSKGWEIFKSMERDHSIKPRMEHYACMVDLLGRSGSLKEALDFIMGMPLKPNS 186 ACGHAGLV+KGW I +SMERD+ +KPRMEHYACMVDLLGR+GSL++A +F+M MP KP S Sbjct: 393 ACGHAGLVAKGWTILESMERDYLLKPRMEHYACMVDLLGRAGSLQQAWEFVMRMPEKPGS 452 Query: 187 DVWGALLGASRLHNNADMA 243 DVW ALL + +LH + +MA Sbjct: 453 DVWAALLSSCQLHGDVEMA 471 >ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1| predicted protein [Populus trichocarpa] Length = 530 Score = 122 bits (305), Expect = 4e-26 Identities = 55/79 (69%), Positives = 66/79 (83%) Frame = +1 Query: 7 ACGHAGLVSKGWEIFKSMERDHSIKPRMEHYACMVDLLGRSGSLKEALDFIMGMPLKPNS 186 ACGHAGLV+KG EIF SMERD+S KPRMEHYACMVDLLGR+G+L++A + + GMP KPNS Sbjct: 390 ACGHAGLVTKGREIFDSMERDYSTKPRMEHYACMVDLLGRAGNLQQAWELVKGMPEKPNS 449 Query: 187 DVWGALLGASRLHNNADMA 243 DVW ALL + +H N +MA Sbjct: 450 DVWAALLSSCNMHGNVEMA 468 >ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690, mitochondrial [Vitis vinifera] Length = 533 Score = 122 bits (305), Expect = 4e-26 Identities = 54/79 (68%), Positives = 67/79 (84%) Frame = +1 Query: 7 ACGHAGLVSKGWEIFKSMERDHSIKPRMEHYACMVDLLGRSGSLKEALDFIMGMPLKPNS 186 ACGHAGLV+KGW I +SMERD+ +KPRMEHYACMVDLLGR+GSL++A +F+M MP KP S Sbjct: 393 ACGHAGLVAKGWTILESMERDYLLKPRMEHYACMVDLLGRAGSLQQAWEFVMRMPEKPGS 452 Query: 187 DVWGALLGASRLHNNADMA 243 DVW ALL + +LH + +MA Sbjct: 453 DVWAALLSSCQLHGDVEMA 471