BLASTX nr result

ID: Coptis21_contig00033694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033694
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001761054.1| predicted protein [Physcomitrella patens sub...    68   9e-10
ref|XP_002971671.1| hypothetical protein SELMODRAFT_412188 [Sela...    62   5e-08
ref|XP_002965668.1| hypothetical protein SELMODRAFT_407234 [Sela...    61   8e-08
ref|XP_001775930.1| predicted protein [Physcomitrella patens sub...    57   2e-06

>ref|XP_001761054.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687740|gb|EDQ74121.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 229

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
 Frame = +3

Query: 66  SQSTLNVKILNAEGLKDNKFLGKMKSYVVIWINPQLKQXXXXXXXXXXXXXYDQSFSFPL 245
           S  TL V +L AEGLK+   L KM  Y V W+ P  K+             ++ + SFP+
Sbjct: 2   SGPTLEVIVLAAEGLKNVNILRKMSVYAVAWVAPDYKRTTSVHSKAGRNPFWNDALSFPV 61

Query: 246 SPQTLQNPNSCITVQIISPSIHNKKKVIGSATMSVRDV---------RFEEQVFALQIWR 398
           +   L +P S +T+Q+ S    +  +++GS  +++RD+           E  + AL + R
Sbjct: 62  TDDILLHPCSALTIQVYSAGTVS-PRLVGSTHLALRDIARMKATKTNSEEGDIVALPLQR 120

Query: 399 PSGRAHGLV 425
           PSGR  G+V
Sbjct: 121 PSGRTQGIV 129


>ref|XP_002971671.1| hypothetical protein SELMODRAFT_412188 [Selaginella moellendorffii]
           gi|300160803|gb|EFJ27420.1| hypothetical protein
           SELMODRAFT_412188 [Selaginella moellendorffii]
          Length = 373

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
 Frame = +3

Query: 60  DDSQSTLNVKILNAEGLKDNKFLGKMKSYVVIWINPQLKQXXXXXXXXXXXXXYDQSFSF 239
           D   ++L V I++A+GL+D    G+M  Y + WI+P++K              +D     
Sbjct: 21  DRHHNSLEVTIISAQGLRDTCIFGRMSPYALAWIDPEVKYCTHVAHNAGSNPAWDHKMYI 80

Query: 240 PLSPQTLQNPNSCITVQIISPSIHNKKKVIGSATMSVRDVRFEE-QVFALQIWRPSGRAH 416
           P  P +L+    C  VQI S        ++GS  + + DV     Q  A Q+ RPSGR H
Sbjct: 81  P-RPGSLRGVELC--VQIFSRGSGTNDPIVGSTKIPLGDVSDGGLQYMACQLQRPSGRIH 137

Query: 417 GLV 425
           GL+
Sbjct: 138 GLL 140


>ref|XP_002965668.1| hypothetical protein SELMODRAFT_407234 [Selaginella moellendorffii]
           gi|300166482|gb|EFJ33088.1| hypothetical protein
           SELMODRAFT_407234 [Selaginella moellendorffii]
          Length = 373

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
 Frame = +3

Query: 60  DDSQSTLNVKILNAEGLKDNKFLGKMKSYVVIWINPQLKQXXXXXXXXXXXXXYDQSFSF 239
           D   ++L V I++A+GL+D    G+M  Y + WI+P++K              +D     
Sbjct: 21  DRHHNSLEVTIISAQGLRDTCIFGRMSPYALAWIDPEVKYCTHVAHNAGSNPAWDHKMYI 80

Query: 240 PLSPQTLQNPNSCITVQIISPSIHNKKKVIGSATMSVRDV-RFEEQVFALQIWRPSGRAH 416
           P  P +L+    C  VQI S        ++GS  + + DV     Q  A Q+ RPSGR H
Sbjct: 81  P-RPGSLRGVELC--VQIFSRGSGTNDPIVGSTKIPLGDVIDGGLQYMACQLQRPSGRIH 137

Query: 417 GLV 425
           GL+
Sbjct: 138 GLL 140


>ref|XP_001775930.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162672762|gb|EDQ59295.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 330

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
 Frame = +3

Query: 78  LNVKILNAEGLKDNKFLGKMKSYVVIWINPQLKQXXXXXXXXXXXXXYDQSFSFPLSPQT 257
           L V IL AE LK+   LGKM  YV+ WI   LK+             ++     P+S   
Sbjct: 23  LEVVILAAEDLKNVNVLGKMSVYVMAWIESALKRSTSVRHKTGKNAVWNDCLFLPVSDDM 82

Query: 258 LQNPNSCITVQIISPSIHNKKKVIGSATMSVRDV---------RFEEQVFALQIWRPSGR 410
           L NP+S +TVQ+ S    +   V+G++ +++ D+           E  +  L + R SGR
Sbjct: 83  LLNPHSSLTVQVYSTGTVS-PSVVGTSYLALADIARMKASKTNSDEGDIVTLPLHRRSGR 141

Query: 411 AHGLVR 428
             G ++
Sbjct: 142 TQGSIK 147


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