BLASTX nr result
ID: Coptis21_contig00033666
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00033666 (918 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein lig... 292 8e-77 emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera] 290 2e-76 ref|XP_002525919.1| Protein pim1, putative [Ricinus communis] gi... 285 1e-74 ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|2... 284 2e-74 ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein lig... 280 3e-73 >ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis vinifera] gi|298204453|emb|CBI16933.3| unnamed protein product [Vitis vinifera] Length = 478 Score = 292 bits (747), Expect = 8e-77 Identities = 133/168 (79%), Positives = 146/168 (86%) Frame = -2 Query: 581 MGVLDVLGETEQLVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGV 402 M + D+ GE+ + N+PTKSAIYVWGYNQ GQTGR KE LRIPK LPPELFGCP G Sbjct: 1 MDIGDIFGESRPV--NIPTKSAIYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGA 58 Query: 401 NARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKRPQKVNQFQTEFVKSVS 222 N+RWL IACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRK P+KV Q QTEFVKS+S Sbjct: 59 NSRWLSIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSIS 118 Query: 221 CGAHCTAAISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTV 78 CGAHCTAAI+EPRE +G +STSRLWVWGQNQGSNYP L+WGAFTPNT+ Sbjct: 119 CGAHCTAAIAEPREKNGIVSTSRLWVWGQNQGSNYPHLFWGAFTPNTI 166 Score = 60.1 bits (144), Expect = 7e-07 Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 9/129 (6%) Frame = -2 Query: 539 NNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNARWLDIACGREHT 360 N + + S ++VWG NQ P LF N ++CG HT Sbjct: 134 NGIVSTSRLWVWGQNQGSNY----------------PHLFWGAFTPNTIIRQVSCGAVHT 177 Query: 359 AAVASDGSLFTWGANDFGQLGDG-TEDGRKRPQKVNQFQTEF--------VKSVSCGAHC 207 A++ +G + WG N++GQLG G T +G + + +N + F + VSCG + Sbjct: 178 VALSEEGLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFFNEAPELVKITQVSCGEYH 237 Query: 206 TAAISEPRE 180 TAAISE E Sbjct: 238 TAAISENGE 246 >emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera] Length = 461 Score = 290 bits (743), Expect = 2e-76 Identities = 133/168 (79%), Positives = 145/168 (86%) Frame = -2 Query: 581 MGVLDVLGETEQLVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGV 402 M + D+ GE+ + N+PTKSAIYVWGYNQ GQTGR KE LRIPK LPPELFGCP G Sbjct: 1 MDIGDIFGESRPV--NIPTKSAIYVWGYNQRGQTGRNGKELQLRIPKQLPPELFGCPAGA 58 Query: 401 NARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKRPQKVNQFQTEFVKSVS 222 N+RWL IACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRK P+KV Q QTEFVKS S Sbjct: 59 NSRWLSIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKHPKKVKQLQTEFVKSXS 118 Query: 221 CGAHCTAAISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTV 78 CGAHCTAAI+EPRE +G +STSRLWVWGQNQGSNYP L+WGAFTPNT+ Sbjct: 119 CGAHCTAAIAEPREKNGIVSTSRLWVWGQNQGSNYPHLFWGAFTPNTI 166 Score = 59.3 bits (142), Expect = 1e-06 Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 9/129 (6%) Frame = -2 Query: 539 NNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNARWLDIACGREHT 360 N + + S ++VWG NQ P LF N ++CG HT Sbjct: 134 NGIVSTSRLWVWGQNQGSNY----------------PHLFWGAFTPNTIIRQVSCGAVHT 177 Query: 359 AAVASDGSLFTWGANDFGQLGDG-TEDGRKRPQKVNQFQ------TEFVK--SVSCGAHC 207 A++ +G + WG N++GQLG G T +G + + +N + E VK VSCG + Sbjct: 178 VALSEEGLVQAWGYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPELVKITQVSCGEYH 237 Query: 206 TAAISEPRE 180 TAAISE E Sbjct: 238 TAAISENGE 246 Score = 58.9 bits (141), Expect = 2e-06 Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 6/135 (4%) Frame = -2 Query: 515 IYVWGYNQSGQTGR--KCKEFH-LRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVAS 345 + WGYN+ GQ GR C+ R+ L P V ++CG HTAA++ Sbjct: 186 VQAWGYNEYGQLGRGITCEGLQGARVINAYSKFLNEAPELVKIT--QVSCGEYHTAAISE 243 Query: 344 DGSLFTWGANDFGQLGD-GTEDGRKR--PQKVNQFQTEFVKSVSCGAHCTAAISEPREND 174 +G ++TWG + GQLG + G K P++V +K ++CG T A++ Sbjct: 244 NGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISIKDIACGGVHTCALT------ 297 Query: 173 GSLSTSRLWVWGQNQ 129 S L+ WG Q Sbjct: 298 ---SKGALYAWGGGQ 309 >ref|XP_002525919.1| Protein pim1, putative [Ricinus communis] gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis] Length = 478 Score = 285 bits (728), Expect = 1e-74 Identities = 131/168 (77%), Positives = 147/168 (87%) Frame = -2 Query: 581 MGVLDVLGETEQLVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGV 402 M + +++GET N+PTKSAIYVWGYN +GQTGRK KE LRIPK L PELFGCP G Sbjct: 1 MDIDEIIGETTTRSMNLPTKSAIYVWGYNHNGQTGRKGKEQELRIPKQLSPELFGCPAGA 60 Query: 401 NARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKRPQKVNQFQTEFVKSVS 222 NARWLDIACGREHTAAVASDGSLFTWGAN+FGQLGDGTE+G+K P+KV Q +TEFVKSVS Sbjct: 61 NARWLDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEEGKKYPKKVKQLETEFVKSVS 120 Query: 221 CGAHCTAAISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTV 78 CGAHCTAAI+EPRENDG++STSRLWVWGQNQGSNYPRL+ GAF NT+ Sbjct: 121 CGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNYPRLFSGAFALNTI 168 Score = 65.5 bits (158), Expect = 2e-08 Identities = 50/161 (31%), Positives = 71/161 (44%), Gaps = 10/161 (6%) Frame = -2 Query: 632 YPKTIEN*SSLFIYLKKMGVLDVLGETEQLVNN-VPTKSAIYVWGYNQSGQTGRKCKEFH 456 YPK ++ + F+ G E N+ + S ++VWG NQ Sbjct: 104 YPKKVKQLETEFVKSVSCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNY-------- 155 Query: 455 LRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDG-TEDG 279 P LF +N ++CG H A++ DG L WG N++GQLG G T +G Sbjct: 156 --------PRLFSGAFALNTIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGITCEG 207 Query: 278 RKRPQKVNQF------QTEFVK--SVSCGAHCTAAISEPRE 180 + P+ +N + E VK VSCG + TAAISE E Sbjct: 208 LQGPRVINAYAKFLDEAPELVKITRVSCGEYHTAAISEKGE 248 Score = 59.3 bits (142), Expect = 1e-06 Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 19/168 (11%) Frame = -2 Query: 515 IYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGVNARWLD----------IACGRE 366 + WGYN+ GQ GR L+ P+ + A++LD ++CG Sbjct: 188 LQAWGYNEYGQLGRGITCEGLQGPRVI---------NAYAKFLDEAPELVKITRVSCGEY 238 Query: 365 HTAAVASDGSLFTWGANDFGQLG-DGTEDGRKR--PQKVNQFQTEFVKSVSCGAHCTAAI 195 HTAA++ G ++TWG GQLG + G K P++V + V+CG T A+ Sbjct: 239 HTAAISEKGEVYTWGLGSTGQLGHTSLQSGNKELLPRRVVALDGILITDVACGGVHTCAV 298 Query: 194 SEPRENDGSLSTSRLWVWGQNQGSNYPRLYWG------AFTPNTVHNF 69 ++ L+ WG GS + +L G +F P+ +F Sbjct: 299 TQ---------KGALYAWG---GSQFGQLGLGPQTGSFSFIPSDTESF 334 >ref|XP_002330952.1| predicted protein [Populus trichocarpa] gi|222873146|gb|EEF10277.1| predicted protein [Populus trichocarpa] Length = 462 Score = 284 bits (727), Expect = 2e-74 Identities = 133/168 (79%), Positives = 150/168 (89%) Frame = -2 Query: 581 MGVLDVLGETEQLVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGV 402 M + +++GET++ VN PTKSAIYVWGYNQSGQTGRK K+ LRIPK LPPELFGCP G Sbjct: 1 MDINEIVGETKRSVN-FPTKSAIYVWGYNQSGQTGRKGKDGQLRIPKQLPPELFGCPAGA 59 Query: 401 NARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKRPQKVNQFQTEFVKSVS 222 NARWLDIACGREHTAAVASDGSLFTWGAN+FGQLGDGTED RK P+KV Q +TEFVKSVS Sbjct: 60 NARWLDIACGREHTAAVASDGSLFTWGANEFGQLGDGTEDSRKYPKKVKQLETEFVKSVS 119 Query: 221 CGAHCTAAISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTV 78 CGAHCTAAI+EPR+NDG++ SRLWVWGQNQGSNYPRL+ GAF+PNT+ Sbjct: 120 CGAHCTAAIAEPRQNDGTI-LSRLWVWGQNQGSNYPRLFCGAFSPNTI 166 Score = 63.5 bits (153), Expect = 6e-08 Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 9/160 (5%) Frame = -2 Query: 632 YPKTIEN*SSLFIYLKKMGVLDVLGETEQLVNNVPTKSAIYVWGYNQSGQTGRKCKEFHL 453 YPK ++ + F+ G E N+ S ++VWG NQ Sbjct: 103 YPKKVKQLETEFVKSVSCGAHCTAAIAEPRQNDGTILSRLWVWGQNQGSNY--------- 153 Query: 452 RIPKHLPPELFGCPGGVNARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDG-TEDGR 276 P LF N ++CG H A++ DG L WG N++GQLG G T +G Sbjct: 154 -------PRLFCGAFSPNTIICQVSCGAVHVVALSEDGLLQAWGYNEYGQLGRGFTCEGL 206 Query: 275 KRPQKVNQF------QTEFVK--SVSCGAHCTAAISEPRE 180 + + +N + E VK VSCG + TAAISE E Sbjct: 207 QGARVINAYAKFLDEAPELVKITQVSCGEYHTAAISEKGE 246 Score = 60.8 bits (146), Expect = 4e-07 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 9/158 (5%) Frame = -2 Query: 515 IYVWGYNQSGQTGR--KCKEFH-LRIPKHLPPELFGCPGGVNARWLDIACGREHTAAVAS 345 + WGYN+ GQ GR C+ R+ L P V ++CG HTAA++ Sbjct: 186 LQAWGYNEYGQLGRGFTCEGLQGARVINAYAKFLDEAPELVKIT--QVSCGEYHTAAISE 243 Query: 344 DGSLFTWGANDFGQLG-DGTEDGRKR--PQKVNQFQTEFVKSVSCGAHCTAAISEPREND 174 G ++TWG + GQLG + G K P++V F+K V+CG T A ++ Sbjct: 244 KGEVYTWGLGNMGQLGHTSLQSGDKELLPRRVVALDGIFIKDVACGGVHTCAATQ----- 298 Query: 173 GSLSTSRLWVWGQNQGSNY---PRLYWGAFTPNTVHNF 69 L+ WG Q P+ +F P+ +F Sbjct: 299 ----KGALYAWGGGQAGQLGLGPQTGSFSFIPSESESF 332 >ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform 2 [Cucumis sativus] Length = 472 Score = 280 bits (717), Expect = 3e-73 Identities = 127/168 (75%), Positives = 147/168 (87%) Frame = -2 Query: 581 MGVLDVLGETEQLVNNVPTKSAIYVWGYNQSGQTGRKCKEFHLRIPKHLPPELFGCPGGV 402 M + D+ G T+ + ++P KSAIYVWGYNQSGQTGRK K+ LR+P+ L P+LFGCPG + Sbjct: 1 MDIDDIFGMTQNV--SLPRKSAIYVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEI 58 Query: 401 NARWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEDGRKRPQKVNQFQTEFVKSVS 222 N+RWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTE+ K P+KVNQ Q EFVKSVS Sbjct: 59 NSRWLDIACGREHTAAVASDGSLFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVS 118 Query: 221 CGAHCTAAISEPRENDGSLSTSRLWVWGQNQGSNYPRLYWGAFTPNTV 78 CGAHCTAAI+EPRENDG+LST RLW+WGQNQGSN+PRL+WGAFTP T+ Sbjct: 119 CGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSNFPRLFWGAFTPQTI 166 Score = 58.5 bits (140), Expect = 2e-06 Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 6/135 (4%) Frame = -2 Query: 515 IYVWGYNQSGQTGRKCKEFHL---RIPKHLPPELFGCPGGVNARWLDIACGREHTAAVAS 345 + WGYN+ GQ GR L RI L P V ++CG H+AA++ Sbjct: 186 LQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTIT--KVSCGEYHSAAISE 243 Query: 344 DGSLFTWGANDFGQLGD---GTEDGRKRPQKVNQFQTEFVKSVSCGAHCTAAISEPREND 174 +G ++TWG GQLG + D P++V VK ++CG T AI++ + Sbjct: 244 NGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGVHTCAITQ----N 299 Query: 173 GSLSTSRLWVWGQNQ 129 GS L+ WG Q Sbjct: 300 GS-----LYAWGGGQ 309