BLASTX nr result

ID: Coptis21_contig00033642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033642
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66820.1| hypothetical protein VITISV_003496 [Vitis vinifera]    55   5e-06

>emb|CAN66820.1| hypothetical protein VITISV_003496 [Vitis vinifera]
          Length = 341

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 50/143 (34%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
 Frame = -2

Query: 415 FELDMEASDFYKNEPFRSAPSLLANCCKSEDEISKAVPVNQYLEEEKGHTQHGXXXXXXX 236
           FE D EA  F  ++ F SAPSLLAN   S   IS AVPV +    E  + Q         
Sbjct: 139 FESDFEAFGFETDDSFSSAPSLLANRLMSTVAISTAVPVQKTSLNEDSNDQPESPSSPAS 198

Query: 235 XXXXXXXXXXXXXXXXXXXXXFECFFPQFSPDSDYHDKAHGRKENCSPTPPD------PR 74
                                 +C FP F P+S +  K  G  E  SP PP+       R
Sbjct: 199 ETNSSTSXYATGTTSLVGSSFLDCLFPLFPPNSGFLAKV-GCPEG-SPPPPELQNKGLDR 256

Query: 73  ESTHTM---RTPTLGELIRVSYR 14
           E+  ++   R PTLGELI  S R
Sbjct: 257 ETNSSVIVRRAPTLGELIMKSRR 279


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