BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033638
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   129   3e-28
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   129   5e-28
emb|CBI36837.3| unnamed protein product [Vitis vinifera]              127   1e-27
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   103   3e-20

>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  129 bits (325), Expect = 3e-28
 Identities = 72/149 (48%), Positives = 95/149 (63%), Gaps = 5/149 (3%)
 Frame = +1

Query: 1   IMNFTVPTRSYDVNVTPDKRKIFFSDEGSIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKE 180
           IMNFTVPTR+YDVNVTPDKRKIFFSDEGSI+ SLR  +EKIYSPS  SYS  + EEP +E
Sbjct: 302 IMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEE 361

Query: 181 NGSSDLCSYPKKLHTPLSSERHV-----DEEEESIGVEKQSEEEGPQGMVKKRLRDIHEG 345
             +S+L     ++   LSS + +     D +EE+   E+ +E++ P  MVK    ++H  
Sbjct: 362 TDNSELNPPQTQI---LSSSKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAV 418

Query: 346 EGIVHKVDESPTGKDFSLKVHTTGNVDGF 432
           + + H  D+    KDFSL+VH     D F
Sbjct: 419 KEMDHSYDKDSIEKDFSLRVHGIKKADSF 447


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  129 bits (323), Expect = 5e-28
 Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 4/148 (2%)
 Frame = +1

Query: 1    IMNFTVPTRSYDVNVTPDKRKIFFSDEGSIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKE 180
            IMNFTVPTR+YDVNVTPDKRKIFFSDEGSI+ SLR  +EKIYSPS  SYS  + EEP +E
Sbjct: 3001 IMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEE 3060

Query: 181  NGSSDLCSYPKKLHTPLSSER----HVDEEEESIGVEKQSEEEGPQGMVKKRLRDIHEGE 348
              +S+L   P +     SS++      D +EE+   E+ +E++ P  MVK    ++H  +
Sbjct: 3061 TBNSEL--NPPQTQILXSSKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVK 3118

Query: 349  GIVHKVDESPTGKDFSLKVHTTGNVDGF 432
             + H  D+    KDFSL+VH     D F
Sbjct: 3119 EMDHSYDKDSIEKDFSLRVHGIKKADSF 3146


>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  127 bits (320), Expect = 1e-27
 Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 12/196 (6%)
 Frame = +1

Query: 1   IMNFTVPTRSYDVNVTPDKRKIFFSDEGSIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKE 180
           IMNFTVPTR+YDVNVTPDKRKIFFSDEGSI+ SLR  +EKIYSPS  SYS  + EEP +E
Sbjct: 302 IMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEE 361

Query: 181 NGSSDLCSYPKKLHTPLSSERHV-----DEEEESIGVEKQSEEEGPQGMVKKRLRDIHEG 345
             +S+L     ++   LSS + +     D +EE+   E+ +E++ P  MVK    ++H  
Sbjct: 362 TDNSELNPPQTQI---LSSSKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAV 418

Query: 346 EGIVHKVDESPTGKDFSLKVH------TTGNVDGFFSYS-PNQLKTPTASGMKDNCARSP 504
           + + H  D+    KDFSL+VH          +    S S  N  KT  ++G+ ++    P
Sbjct: 419 KEMDHSYDKDSIEKDFSLRVHEMVLKKNNSEMHALVSRSFVNHQKTNDSAGIIES---EP 475

Query: 505 VHTIGKLDSSFRYTPN 552
              +G +DS+F  T N
Sbjct: 476 SKFLG-VDSAFDATEN 490


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  103 bits (258), Expect = 2e-20
 Identities = 59/142 (41%), Positives = 81/142 (57%)
 Frame = +1

Query: 1   IMNFTVPTRSYDVNVTPDKRKIFFSDEGSIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKE 180
           IMNFT+PT + DVNVTPDKRKIFFSDE SI+ +LR  +EK YS S   YS  K E   K 
Sbjct: 298 IMNFTIPTTACDVNVTPDKRKIFFSDESSILLALREGLEKNYSSSNSCYSVNKFENHAKA 357

Query: 181 NGSSDLCSYPKKLHTPLSSERHVDEEEESIGVEKQSEEEGPQGMVKKRLRDIHEGEGIVH 360
             SS LCS P++    LS +   +   +S   +  +E+  P   V+ + +    GE  +H
Sbjct: 358 ADSSQLCS-PREKSNMLSKQSSAN-GNDSEETQTDAEDSSPLMTVEVKSKPFQVGERSIH 415

Query: 361 KVDESPTGKDFSLKVHTTGNVD 426
            ++E    KDF+L++H     D
Sbjct: 416 DIEEKFMMKDFALRLHGIKKTD 437


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  103 bits (256), Expect = 3e-20
 Identities = 73/196 (37%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
 Frame = +1

Query: 1   IMNFTVPTRSYDVNVTPDKRKIFFSDEGSIMQSLRGAIEKIYSPSQCSYSAKKLEEPKKE 180
           IMNF VPTR+ DVNVTPDKRKIFFSDE SI+ +LR  ++ IYSPS  SYS  K EE  K 
Sbjct: 299 IMNFIVPTRACDVNVTPDKRKIFFSDETSILHALREGLQNIYSPSNASYSVNKFEERIKA 358

Query: 181 NGSSDLCS-YPKKLHTPLSSERHVDEEEESIGVEKQSEEEGPQGMVKKRLRDIHEGEGIV 357
             +S  CS + K L          ++ EE +  E  S+       VK +    + GE   
Sbjct: 359 ASNSQSCSPHEKSLVLSKQLSAVSNDAEEILVEEHTSDGSNLLQTVKMKSHPSNVGE--- 415

Query: 358 HKVDESPTGKDFSLKVHTTGNVDGFFSYSPNQLKTPTASGMKDNCARSPVHTIGKLDSSF 537
              DE    KDF+L+VH    V  F + +  QL T     + D    SP   + K  +  
Sbjct: 416 -NRDEKRISKDFTLRVHDIPKVYSFPNSNNRQL-TTLHDTLTDQNTPSPSRVVAKNIAES 473

Query: 538 RYTPNRLKTSPPTATK 585
           R + +  ++   T +K
Sbjct: 474 RGSNSSSRSVQSTISK 489