BLASTX nr result

ID: Coptis21_contig00033636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033636
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623370.1| Proteasome subunit alpha type [Medicago trun...   107   1e-21
ref|XP_004146000.1| PREDICTED: proteasome subunit alpha type-4-l...   106   2e-21
ref|XP_004142051.1| PREDICTED: proteasome subunit alpha type-4-l...   106   2e-21
gb|AFK33803.1| unknown [Medicago truncatula] gi|388517995|gb|AFK...   106   2e-21
ref|XP_003552274.1| PREDICTED: proteasome subunit alpha type-4-l...   106   2e-21

>ref|XP_003623370.1| Proteasome subunit alpha type [Medicago truncatula]
           gi|355498385|gb|AES79588.1| Proteasome subunit alpha
           type [Medicago truncatula]
          Length = 471

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = +1

Query: 289 LTMSRRYDSRTTIFSPEGRLYQVEYAMEFIGNVGCAIGLLSNNGVVLVGEKKITSKLLQT 468
           + MSRRYDSRTTIFSPEGRLYQVEYAME IGN G AIG+LS +GVVLVGEKK+TSKLLQT
Sbjct: 220 IKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQT 279

Query: 469 SKTT 480
           S +T
Sbjct: 280 STST 283


>ref|XP_004146000.1| PREDICTED: proteasome subunit alpha type-4-like [Cucumis sativus]
           gi|449518445|ref|XP_004166252.1| PREDICTED: proteasome
           subunit alpha type-4-like isoform 1 [Cucumis sativus]
           gi|449518447|ref|XP_004166253.1| PREDICTED: proteasome
           subunit alpha type-4-like isoform 2 [Cucumis sativus]
          Length = 250

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/62 (85%), Positives = 57/62 (91%)
 Frame = +1

Query: 295 MSRRYDSRTTIFSPEGRLYQVEYAMEFIGNVGCAIGLLSNNGVVLVGEKKITSKLLQTSK 474
           MSRRYDSRTTIFSPEGRLYQVEYAME IGN G AIG+LS +GVVLVGEKK+TSKLLQTS 
Sbjct: 1   MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTST 60

Query: 475 TT 480
           +T
Sbjct: 61  ST 62


>ref|XP_004142051.1| PREDICTED: proteasome subunit alpha type-4-like [Cucumis sativus]
           gi|449523001|ref|XP_004168513.1| PREDICTED: proteasome
           subunit alpha type-4-like [Cucumis sativus]
          Length = 249

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/62 (85%), Positives = 57/62 (91%)
 Frame = +1

Query: 295 MSRRYDSRTTIFSPEGRLYQVEYAMEFIGNVGCAIGLLSNNGVVLVGEKKITSKLLQTSK 474
           MSRRYDSRTTIFSPEGRLYQVEYAME IGN G AIG+LS +GVVLVGEKK+TSKLLQTS 
Sbjct: 1   MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSTDGVVLVGEKKVTSKLLQTST 60

Query: 475 TT 480
           +T
Sbjct: 61  ST 62


>gb|AFK33803.1| unknown [Medicago truncatula] gi|388517995|gb|AFK47059.1| unknown
           [Medicago truncatula]
          Length = 250

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/62 (85%), Positives = 57/62 (91%)
 Frame = +1

Query: 295 MSRRYDSRTTIFSPEGRLYQVEYAMEFIGNVGCAIGLLSNNGVVLVGEKKITSKLLQTSK 474
           MSRRYDSRTTIFSPEGRLYQVEYAME IGN G AIG+LS +GVVLVGEKK+TSKLLQTS 
Sbjct: 1   MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60

Query: 475 TT 480
           +T
Sbjct: 61  ST 62


>ref|XP_003552274.1| PREDICTED: proteasome subunit alpha type-4-like isoform 1 [Glycine
           max]
          Length = 250

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/62 (85%), Positives = 57/62 (91%)
 Frame = +1

Query: 295 MSRRYDSRTTIFSPEGRLYQVEYAMEFIGNVGCAIGLLSNNGVVLVGEKKITSKLLQTSK 474
           MSRRYDSRTTIFSPEGRLYQVEYAME IGN G AIG+LS +GVVLVGEKK+TSKLLQTS 
Sbjct: 1   MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTST 60

Query: 475 TT 480
           +T
Sbjct: 61  ST 62


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