BLASTX nr result
ID: Coptis21_contig00033615
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00033615 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi... 151 5e-35 emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera] 150 8e-35 ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi... 148 4e-34 emb|CBI41008.3| unnamed protein product [Vitis vinifera] 144 6e-33 ref|XP_002518584.1| pentatricopeptide repeat-containing protein,... 140 8e-32 >ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160, mitochondrial [Vitis vinifera] Length = 383 Score = 151 bits (382), Expect = 5e-35 Identities = 80/132 (60%), Positives = 93/132 (70%) Frame = -3 Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217 LV+ FKK S FR IY + +RRLA AK IEE+LE QKK+ DI+ EGFA+RLI Sbjct: 42 LVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLI 101 Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37 SLYGK GMF HAFK+FD+MP+ KC RSV SFN LL A + SK FDK E F EL S+LS+ Sbjct: 102 SLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSV 161 Query: 36 TLDHYSYNIVIK 1 D SYNIVIK Sbjct: 162 EPDLVSYNIVIK 173 >emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera] Length = 383 Score = 150 bits (380), Expect = 8e-35 Identities = 80/132 (60%), Positives = 93/132 (70%) Frame = -3 Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217 LV+ FKK S FR IY + +RRLA AK IEE+LE QKK+ DI+ EGFA+RLI Sbjct: 42 LVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLI 101 Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37 SLYGK GMF HAFK+FD+MP+ KC RSV SFN LL A + SK FDK E F EL S+LS+ Sbjct: 102 SLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSV 161 Query: 36 TLDHYSYNIVIK 1 D SYNIVIK Sbjct: 162 EPDLVSYNIVIK 173 >ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160, mitochondrial-like [Vitis vinifera] Length = 382 Score = 148 bits (374), Expect = 4e-34 Identities = 78/131 (59%), Positives = 92/131 (70%) Frame = -3 Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217 LV+ FKK S FR IY + +RRLA AK IEE+LE QKK+ DI+ EGFA+RLI Sbjct: 42 LVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLI 101 Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37 +LYGK GMF HAFK+FD+MP+ KC RSV SFN LL A + SK FDK E F EL S+LS+ Sbjct: 102 TLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSV 161 Query: 36 TLDHYSYNIVI 4 D SYNIVI Sbjct: 162 EPDLVSYNIVI 172 >emb|CBI41008.3| unnamed protein product [Vitis vinifera] Length = 379 Score = 144 bits (364), Expect = 6e-33 Identities = 74/131 (56%), Positives = 90/131 (68%) Frame = -3 Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217 LV+ FKK S FR IY + +RRLA AK IEE+LE QKK+ DI+ EGFA+RLI Sbjct: 50 LVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLI 109 Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37 SLYGK GMF HAFK+FD+MP+ KC RSV SFN LL A + SK FDK + F+EL L + Sbjct: 110 SLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGV 169 Query: 36 TLDHYSYNIVI 4 D SYNI++ Sbjct: 170 VPDVVSYNIIV 180 >ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 377 Score = 140 bits (354), Expect = 8e-32 Identities = 70/132 (53%), Positives = 89/132 (67%) Frame = -3 Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217 LV+ +K+ S P FR + Y +RRL+ AK+ +E+ LEHQK F DITNE F +RLI Sbjct: 38 LVQRYKRSSESPEFRARHRFYSTIVRRLSFAKQFSMVEDFLEHQKNFADITNEQFTIRLI 97 Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37 SLYGK GM HA +LFD+MP+LKC R+V+SFN LL A I S FDK + R+ +L I Sbjct: 98 SLYGKAGMLDHAHRLFDEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGI 157 Query: 36 TLDHYSYNIVIK 1 T D S+NIVIK Sbjct: 158 TPDVVSFNIVIK 169