BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033615
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   151   5e-35
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   150   8e-35
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              144   6e-33
ref|XP_002518584.1| pentatricopeptide repeat-containing protein,...   140   8e-32

>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score =  151 bits (382), Expect = 5e-35
 Identities = 80/132 (60%), Positives = 93/132 (70%)
 Frame = -3

Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217
           LV+ FKK S    FR    IY + +RRLA AK    IEE+LE QKK+ DI+ EGFA+RLI
Sbjct: 42  LVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLI 101

Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37
           SLYGK GMF HAFK+FD+MP+ KC RSV SFN LL A + SK FDK E  F EL S+LS+
Sbjct: 102 SLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSV 161

Query: 36  TLDHYSYNIVIK 1
             D  SYNIVIK
Sbjct: 162 EPDLVSYNIVIK 173


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  150 bits (380), Expect = 8e-35
 Identities = 80/132 (60%), Positives = 93/132 (70%)
 Frame = -3

Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217
           LV+ FKK S    FR    IY + +RRLA AK    IEE+LE QKK+ DI+ EGFA+RLI
Sbjct: 42  LVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLI 101

Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37
           SLYGK GMF HAFK+FD+MP+ KC RSV SFN LL A + SK FDK E  F EL S+LS+
Sbjct: 102 SLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSV 161

Query: 36  TLDHYSYNIVIK 1
             D  SYNIVIK
Sbjct: 162 EPDLVSYNIVIK 173


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  148 bits (374), Expect = 4e-34
 Identities = 78/131 (59%), Positives = 92/131 (70%)
 Frame = -3

Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217
           LV+ FKK S    FR    IY + +RRLA AK    IEE+LE QKK+ DI+ EGFA+RLI
Sbjct: 42  LVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLI 101

Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37
           +LYGK GMF HAFK+FD+MP+ KC RSV SFN LL A + SK FDK E  F EL S+LS+
Sbjct: 102 TLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSV 161

Query: 36  TLDHYSYNIVI 4
             D  SYNIVI
Sbjct: 162 EPDLVSYNIVI 172


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/131 (56%), Positives = 90/131 (68%)
 Frame = -3

Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217
           LV+ FKK S    FR    IY + +RRLA AK    IEE+LE QKK+ DI+ EGFA+RLI
Sbjct: 50  LVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGFAVRLI 109

Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37
           SLYGK GMF HAFK+FD+MP+ KC RSV SFN LL A + SK FDK +  F+EL   L +
Sbjct: 110 SLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGV 169

Query: 36  TLDHYSYNIVI 4
             D  SYNI++
Sbjct: 170 VPDVVSYNIIV 180


>ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542429|gb|EEF43971.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 377

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/132 (53%), Positives = 89/132 (67%)
 Frame = -3

Query: 396 LVENFKKLSAFPWFRKNDKIYVKAIRRLALAKELPKIEEVLEHQKKFDDITNEGFAMRLI 217
           LV+ +K+ S  P FR   + Y   +RRL+ AK+   +E+ LEHQK F DITNE F +RLI
Sbjct: 38  LVQRYKRSSESPEFRARHRFYSTIVRRLSFAKQFSMVEDFLEHQKNFADITNEQFTIRLI 97

Query: 216 SLYGKVGMFRHAFKLFDDMPELKCARSVKSFNTLLIASIQSKNFDKTEKLFRELSSRLSI 37
           SLYGK GM  HA +LFD+MP+LKC R+V+SFN LL A I S  FDK +   R+   +L I
Sbjct: 98  SLYGKAGMLDHAHRLFDEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGI 157

Query: 36  TLDHYSYNIVIK 1
           T D  S+NIVIK
Sbjct: 158 TPDVVSFNIVIK 169