BLASTX nr result
ID: Coptis21_contig00033597
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00033597 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004165332.1| PREDICTED: FHA domain-containing protein At4... 78 7e-13 ref|XP_004134423.1| PREDICTED: FHA domain-containing protein At4... 78 7e-13 pdb|1UHT|A Chain A, Solution Structure Of The Fha Domain Of Arab... 78 8e-13 ref|NP_193185.1| SMAD/FHA domain-containing protein [Arabidopsis... 78 8e-13 ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|2... 74 9e-12 >ref|XP_004165332.1| PREDICTED: FHA domain-containing protein At4g14490-like [Cucumis sativus] Length = 159 Score = 78.2 bits (191), Expect = 7e-13 Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%) Frame = +2 Query: 2 KGPRKGATLLRDPSFSSKRIRIGRVWK-NSLKIKEEGVSEKHLLIEFDDKSRKWVICDLC 178 KGPR+G TL P + IRIGR+ + NS+ IK+ G+S KHL IE + S W++ DL Sbjct: 12 KGPREGETLDFPPGAT---IRIGRIVRGNSVAIKDAGISTKHLSIESESVSGNWMLRDLD 68 Query: 179 STNGTLLNHCLIHPKKWMSLRDGDFIRIGEVTSIKVGI 292 S+NGT +N + P +L DGD I+ GE+TSI V I Sbjct: 69 SSNGTFVNDIKLPPHDAFALHDGDTIKCGELTSIFVRI 106 >ref|XP_004134423.1| PREDICTED: FHA domain-containing protein At4g14490-like [Cucumis sativus] Length = 406 Score = 78.2 bits (191), Expect = 7e-13 Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%) Frame = +2 Query: 2 KGPRKGATLLRDPSFSSKRIRIGRVWK-NSLKIKEEGVSEKHLLIEFDDKSRKWVICDLC 178 KGPR+G TL P + IRIGR+ + NS+ IK+ G+S KHL IE + S W++ DL Sbjct: 12 KGPREGETLDFPPGAT---IRIGRIVRGNSVAIKDAGISTKHLSIESESVSGNWMLRDLD 68 Query: 179 STNGTLLNHCLIHPKKWMSLRDGDFIRIGEVTSIKVGI 292 S+NGT +N + P +L DGD I+ GE+TSI V I Sbjct: 69 SSNGTFVNDIKLPPHDAFALHDGDTIKCGELTSIFVRI 106 >pdb|1UHT|A Chain A, Solution Structure Of The Fha Domain Of Arabidopsis Thaliana Hypothetical Protein Length = 118 Score = 77.8 bits (190), Expect = 8e-13 Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 1/99 (1%) Frame = +2 Query: 2 KGPRKGATLLRDPSFSSKRIRIGRVWK-NSLKIKEEGVSEKHLLIEFDDKSRKWVICDLC 178 KGPR+G L P + IR+GR+ + N + IK+ G+S KHL IE D S WVI DL Sbjct: 19 KGPREGDALDYKPGST---IRVGRIVRGNEIAIKDAGISTKHLRIESD--SGNWVIQDLG 73 Query: 179 STNGTLLNHCLIHPKKWMSLRDGDFIRIGEVTSIKVGIL 295 S+NGTLLN + P+ ++L DGD I++GE TSI V + Sbjct: 74 SSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVNFV 112 >ref|NP_193185.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana] gi|73921130|sp|O23305.1|Y4449_ARATH RecName: Full=FHA domain-containing protein At4g14490 gi|2244805|emb|CAB10228.1| hypothetical protein [Arabidopsis thaliana] gi|7268155|emb|CAB78491.1| hypothetical protein [Arabidopsis thaliana] gi|20466564|gb|AAM20599.1| unknown protein [Arabidopsis thaliana] gi|22136374|gb|AAM91265.1| unknown protein [Arabidopsis thaliana] gi|332658050|gb|AEE83450.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana] Length = 386 Score = 77.8 bits (190), Expect = 8e-13 Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 1/99 (1%) Frame = +2 Query: 2 KGPRKGATLLRDPSFSSKRIRIGRVWK-NSLKIKEEGVSEKHLLIEFDDKSRKWVICDLC 178 KGPR+G L P + IR+GR+ + N + IK+ G+S KHL IE D S WVI DL Sbjct: 12 KGPREGDALDYKPGST---IRVGRIVRGNEIAIKDAGISTKHLRIESD--SGNWVIQDLG 66 Query: 179 STNGTLLNHCLIHPKKWMSLRDGDFIRIGEVTSIKVGIL 295 S+NGTLLN + P+ ++L DGD I++GE TSI V + Sbjct: 67 SSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVNFV 105 >ref|XP_002315723.1| predicted protein [Populus trichocarpa] gi|222864763|gb|EEF01894.1| predicted protein [Populus trichocarpa] Length = 383 Score = 74.3 bits (181), Expect = 9e-12 Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 1/96 (1%) Frame = +2 Query: 2 KGPRKGATLLRDPSFSSKRIRIGRVWK-NSLKIKEEGVSEKHLLIEFDDKSRKWVICDLC 178 +GPR+G TL P + +RIGRV + N++ IK+ G+S KHL I + KW + DL Sbjct: 12 RGPREGETLEFRPGST---VRIGRVVRGNNVPIKDAGISSKHLAIV--SEPGKWSLQDLD 66 Query: 179 STNGTLLNHCLIHPKKWMSLRDGDFIRIGEVTSIKV 286 S+NGT LN + P K LRDGD I++GE+TSI V Sbjct: 67 SSNGTTLNTTTLSPYKSFDLRDGDTIKLGELTSILV 102