BLASTX nr result

ID: Coptis21_contig00033574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033574
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273512.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    62   6e-08
ref|XP_003618131.1| FAR1-related protein [Medicago truncatula] g...    60   1e-07
ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    60   2e-07
emb|CAN68194.1| hypothetical protein VITISV_036221 [Vitis vinifera]    60   2e-07
ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    60   2e-07

>ref|XP_002273512.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 759

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
 Frame = +3

Query: 3   FETRVRSTDRKKGVDFAMGCLMVCTREGVYNSKREVGVSRNTSTVKCSCSAKMRIMKRKH 182
           F TRV    R +     +   +VC+REG      E    R  +  +  C A+M + K+++
Sbjct: 88  FSTRVSVYQRSRRDGSIICRQIVCSREGFRREGGENRSKRQRTVTRVGCKAQMTV-KKQN 146

Query: 183 EEMYFVSCVENEHSHNLVSPAKRNCMKSNKNMPEAAKRLTEIFSDNGLPVRKVVAVFNGE 362
              + V+ +  EH+H+LV P K +C++S++++   A+ L +     G+    V++V   E
Sbjct: 147 SGKWAVTKLVKEHNHDLVPPDKVHCLRSHRHVSGPARSLIDTLQAAGMGPSGVMSVLIKE 206

Query: 363 -----ELGFTKKDCWNH 398
                 +GFTK DC N+
Sbjct: 207 SGGINNVGFTKVDCQNY 223


>ref|XP_003618131.1| FAR1-related protein [Medicago truncatula]
           gi|355519466|gb|AET01090.1| FAR1-related protein
           [Medicago truncatula]
          Length = 786

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
 Frame = +3

Query: 3   FETRVRSTDRKKGVDFAMGCLMVCTREGVYNSK----REVGVSRNTSTVKCSCSAKMRIM 170
           F TRV S+ R +     +    VC +EG  N      ++  + R  +  +  C A + + 
Sbjct: 85  FSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTVTRVGCKASLSVK 144

Query: 171 KRKHEEMYFVSCVENEHSHNLVSPAKRNCMKSNKNMPEAAKRLTEIFSDNGLPVRKVVAV 350
                  + VS    EH+H LV P + +C++S++ +  +AK L +     G+  R++++ 
Sbjct: 145 MHDSSAKWIVSGFVREHNHELVPPDQVHCLRSHRQISGSAKTLIDTLQAAGMGPRRIMSA 204

Query: 351 FNGE-----ELGFTKKDCWNH 398
              E     ++GFT+ DC N+
Sbjct: 205 LIKEYGGISKVGFTEVDCRNY 225


>ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 783

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
 Frame = +3

Query: 3   FETRVRSTDRKKGVDFAMGCLMVCTREGVYN------SKREVGVSRNTSTVKCSCSAKMR 164
           F TRV S+ R +     +    VC +EG  N        RE+   R  + V C  S  ++
Sbjct: 86  FSTRVSSSRRSRRDGAIIQRSFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVK 145

Query: 165 IMKRKHEEMYFVSCVENEHSHNLVSPAKRNCMKSNKNMPEAAKRLTEIFSDNGLPVRKVV 344
           I   +    + VS    EH+H LV P K +C++S++ +   AK L +     G+  R+++
Sbjct: 146 I---QDSGKWVVSGFTKEHNHELVPPDKVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIM 202

Query: 345 AVFNGE-----ELGFTKKDCWNH 398
           +    E     ++GFT+ DC N+
Sbjct: 203 SALIKEYGGISKVGFTEVDCRNY 225


>emb|CAN68194.1| hypothetical protein VITISV_036221 [Vitis vinifera]
          Length = 841

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
 Frame = +3

Query: 3   FETRVRSTDRKKGVDFAMGCLMVCTREGVYN------SKREVGVSRNTSTVKCSCSAKMR 164
           F TRV S+ R +     +    VC +EG  N        RE+   R  + V C  S  ++
Sbjct: 86  FSTRVSSSRRSRRDGAIIQRSFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVK 145

Query: 165 IMKRKHEEMYFVSCVENEHSHNLVSPAKRNCMKSNKNMPEAAKRLTEIFSDNGLPVRKVV 344
           I   +    + VS    EH+H LV P K +C++S++ +   AK L +     G+  R+++
Sbjct: 146 I---QDSGKWVVSGFTKEHNHELVPPDKVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIM 202

Query: 345 AVFNGE-----ELGFTKKDCWNH 398
           +    E     ++GFT+ DC N+
Sbjct: 203 SALIKEYGGISKVGFTEVDCRNY 225


>ref|XP_002263941.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 773

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
 Frame = +3

Query: 3   FETRVRSTDRKKGVDFAMGCLMVCTREGVYNSKREVG----VSRNTSTVKCSCSAKMRIM 170
           F TRV  + R +     +    VC +EG    K + G    V R  +  +  C A M ++
Sbjct: 91  FSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVDKEKPGRDGRVKRPRAETRVGCKA-MLVV 149

Query: 171 KRKHEEMYFVSCVENEHSHNLVSPAKRNCMKSNKNMPEAAKRLTEIFSDNGLPVRKVVAV 350
           K +    + VS    EH+H LV P K +C++S++++  AAK L +     G+    +++ 
Sbjct: 150 KIQDSSRWVVSGFVKEHNHELVPPDKVHCLRSHRHVSGAAKSLIDTLQGAGIGPSGIMSA 209

Query: 351 FNGE-----ELGFTKKDCWNH 398
              E      +GFT++DC N+
Sbjct: 210 LIKEYGGISNVGFTERDCRNY 230


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