BLASTX nr result

ID: Coptis21_contig00033565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033565
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_002530400.1| conserved hypothetical protein [Ricinus comm...   149   2e-34
ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263...   149   3e-34
emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]   149   3e-34

>ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|222851953|gb|EEE89500.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/97 (77%), Positives = 80/97 (82%)
 Frame = -3

Query: 292 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXXXXLDPRSTANLFSNSICMG 113
           ELV+SGCKISAGSDGKVAWRQTPWHHSHA              LDP+STANLFSNS+C G
Sbjct: 177 ELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPKSTANLFSNSVCTG 236

Query: 112 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIW 2
           EKAIN EDCFVLKLEAEP +LRARSSSNVEIIRHT+W
Sbjct: 237 EKAINNEDCFVLKLEAEPSSLRARSSSNVEIIRHTLW 273


>ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|222864226|gb|EEF01357.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/97 (74%), Positives = 79/97 (81%)
 Frame = -3

Query: 292 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXXXXLDPRSTANLFSNSICMG 113
           ELV+SGCKISAGSDGKVAWRQTPWHHSHA              LDP+STANLFSNS+C G
Sbjct: 177 ELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPKSTANLFSNSVCTG 236

Query: 112 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIW 2
           EK IN EDCFVLKLEA+P +LRARS+SNVEIIRHT+W
Sbjct: 237 EKTINNEDCFVLKLEADPSSLRARSTSNVEIIRHTVW 273


>ref|XP_002530400.1| conserved hypothetical protein [Ricinus communis]
           gi|223530049|gb|EEF31970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 425

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/97 (74%), Positives = 79/97 (81%)
 Frame = -3

Query: 292 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXXXXLDPRSTANLFSNSICMG 113
           ELV+SGCKISAGSDGKVAWRQTPWHHSHA              LDP+STANLFSNSIC G
Sbjct: 176 ELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPKSTANLFSNSICAG 235

Query: 112 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIW 2
           EKAIN EDCF+LKLEAE  +LRARS+SNVE+IRHT+W
Sbjct: 236 EKAINGEDCFILKLEAETSSLRARSTSNVEMIRHTVW 272


>ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263234 [Vitis vinifera]
           gi|296086114|emb|CBI31555.3| unnamed protein product
           [Vitis vinifera]
          Length = 426

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/97 (73%), Positives = 77/97 (79%)
 Frame = -3

Query: 292 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXXXXLDPRSTANLFSNSICMG 113
           ELV+SGCKISAGSDG VAWRQTPWHHSHA              LDPRSTANLFSNS+C+G
Sbjct: 175 ELVVSGCKISAGSDGVVAWRQTPWHHSHASRGPPRPLRRALQGLDPRSTANLFSNSVCIG 234

Query: 112 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIW 2
           EK INEEDCF+LKLE E  TLRARSS NVEI+RHT+W
Sbjct: 235 EKTINEEDCFILKLETETSTLRARSSRNVEIMRHTVW 271


>emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]
          Length = 426

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/97 (73%), Positives = 77/97 (79%)
 Frame = -3

Query: 292 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXXXXLDPRSTANLFSNSICMG 113
           ELV+SGCKISAGSDG VAWRQTPWHHSHA              LDPRSTANLFSNS+C+G
Sbjct: 175 ELVVSGCKISAGSDGVVAWRQTPWHHSHASRGPPRPLRRALQGLDPRSTANLFSNSVCIG 234

Query: 112 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIW 2
           EK INEEDCF+LKLE E  TLRARSS NVEI+RHT+W
Sbjct: 235 EKTINEEDCFILKLETETSTLRARSSRNVEIMRHTVW 271


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