BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033561
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
           gi|296087770|emb|CBI35026.3| unnamed protein product
           [Vitis vinifera]
          Length = 675

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = -1

Query: 254 SNLYTNIKKTKKHKPPSLLFTITSSSTHSPNKHVWKRXXXXXXXXXXXXT-HQTRHTHV- 81
           +N+++   KT+KH+   +L ++         K VW+R              H+ R   V 
Sbjct: 33  TNIFSPFNKTQKHRACFILVSVF--------KDVWRRLPDETTSLLSSSRQHRPRKQRVV 84

Query: 80  YLDHSVDMDDLLLSISQTSTQQELYS 3
           +LDHSVDMD+LL SISQTS +QELYS
Sbjct: 85  HLDHSVDMDELLASISQTSNEQELYS 110