BLASTX nr result

ID: Coptis21_contig00033541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033541
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336049.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002522472.1| conserved hypothetical protein [Ricinus comm...   143   1e-32
ref|XP_002266005.2| PREDICTED: uncharacterized protein LOC100260...   140   1e-31
emb|CBI40094.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002266397.1| PREDICTED: uncharacterized protein LOC100264...   135   3e-30

>ref|XP_002336049.1| predicted protein [Populus trichocarpa] gi|222869554|gb|EEF06685.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/96 (72%), Positives = 83/96 (86%)
 Frame = -1

Query: 376 GVAADGGRSIGLAVSPDGLKDWRKYGDGAVLKPSVEEDGWDNSCVGSPCLVQMDGKDDEC 197
           GVAA G RSIGLAVSPDGL+DWR++ D AVL+ SV+ DGWDN  VGSPCLVQMDG+ DE 
Sbjct: 249 GVAAGGKRSIGLAVSPDGLRDWRRFQDEAVLESSVK-DGWDNKGVGSPCLVQMDGEVDEW 307

Query: 196 RLYYRGIGKEGKSGIGLAVSEGNEFRSFRRWTGFHL 89
           RLYYRG+G EG++GIG+A+S+GN+  SFRRWTGFHL
Sbjct: 308 RLYYRGVGNEGRTGIGMAISQGNDVSSFRRWTGFHL 343


>ref|XP_002522472.1| conserved hypothetical protein [Ricinus communis]
           gi|223538357|gb|EEF39964.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 484

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/96 (70%), Positives = 78/96 (81%)
 Frame = -1

Query: 376 GVAADGGRSIGLAVSPDGLKDWRKYGDGAVLKPSVEEDGWDNSCVGSPCLVQMDGKDDEC 197
           GVA+DG RSIGLAVSPDGLKDWR++ DG VLKPS E+DGWDN  VGSPCLVQM+G  DE 
Sbjct: 390 GVASDGKRSIGLAVSPDGLKDWRRFQDGEVLKPS-EKDGWDNRGVGSPCLVQMEGDVDEW 448

Query: 196 RLYYRGIGKEGKSGIGLAVSEGNEFRSFRRWTGFHL 89
           RLYYRG+  EG++GIG+A   GN+  SF RWTGF L
Sbjct: 449 RLYYRGVSNEGRTGIGMAFCVGNDVSSFTRWTGFQL 484


>ref|XP_002266005.2| PREDICTED: uncharacterized protein LOC100260888 [Vitis vinifera]
          Length = 503

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/96 (67%), Positives = 76/96 (79%)
 Frame = -1

Query: 376 GVAADGGRSIGLAVSPDGLKDWRKYGDGAVLKPSVEEDGWDNSCVGSPCLVQMDGKDDEC 197
           GV  D GRSIGLAVSPDGLK+W++  +  VL+PS EEDGWDN  VGSPCLVQM+G  DE 
Sbjct: 409 GVGGDNGRSIGLAVSPDGLKNWKRLQEEPVLEPS-EEDGWDNRAVGSPCLVQMEGNADEW 467

Query: 196 RLYYRGIGKEGKSGIGLAVSEGNEFRSFRRWTGFHL 89
           RLYYRGIG++G+ GIG+AVS+G E    RRW GFHL
Sbjct: 468 RLYYRGIGQQGRKGIGVAVSQGTEITRLRRWAGFHL 503


>emb|CBI40094.3| unnamed protein product [Vitis vinifera]
          Length = 454

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/96 (67%), Positives = 76/96 (79%)
 Frame = -1

Query: 376 GVAADGGRSIGLAVSPDGLKDWRKYGDGAVLKPSVEEDGWDNSCVGSPCLVQMDGKDDEC 197
           GV  D GRSIGLAVSPDGLK+W++  +  VL+PS EEDGWDN  VGSPCLVQM+G  DE 
Sbjct: 360 GVGGDNGRSIGLAVSPDGLKNWKRLQEEPVLEPS-EEDGWDNRAVGSPCLVQMEGNADEW 418

Query: 196 RLYYRGIGKEGKSGIGLAVSEGNEFRSFRRWTGFHL 89
           RLYYRGIG++G+ GIG+AVS+G E    RRW GFHL
Sbjct: 419 RLYYRGIGQQGRKGIGVAVSQGTEITRLRRWAGFHL 454


>ref|XP_002266397.1| PREDICTED: uncharacterized protein LOC100264211 [Vitis vinifera]
          Length = 491

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/98 (68%), Positives = 79/98 (80%), Gaps = 2/98 (2%)
 Frame = -1

Query: 376 GVAADGGRSIGLAVSPDGLKDWRKYGDGAVLKPSVEEDGWDNSCVGSPCLVQMDGKDD-- 203
           GV  +G RSIGLAVSPDGLK+WR+  D AVL P+ E+DGWDN  VGSPCLVQMDG  D  
Sbjct: 395 GVDGNGRRSIGLAVSPDGLKEWRRSQDEAVLMPA-EDDGWDNKGVGSPCLVQMDGDGDGG 453

Query: 202 ECRLYYRGIGKEGKSGIGLAVSEGNEFRSFRRWTGFHL 89
           E RLYYRGIG+ G++GIG+AV EG++ R FR+WTGFHL
Sbjct: 454 EWRLYYRGIGQGGRTGIGMAVCEGSDRRRFRKWTGFHL 491


Top