BLASTX nr result

ID: Coptis21_contig00033525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033525
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   114   8e-24
ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   101   6e-20
ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]         101   6e-20
gb|AFW78379.1| hypothetical protein ZEAMMB73_262445 [Zea mays]         98   8e-19
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...    98   8e-19

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  114 bits (285), Expect = 8e-24
 Identities = 64/125 (51%), Positives = 83/125 (66%), Gaps = 12/125 (9%)
 Frame = +1

Query: 1   ANSYVAGSGEAISVSDSFRLFATMSSLTDDVS----GKSTLGVLWRRVLITPSTNEDLLL 168
           A+S++   GEAI V++SFRLF+T+SS   D+S    G ++LGVLWRRV+I   +NEDL  
Sbjct: 461 ASSFLTSHGEAIRVAESFRLFSTISSSNVDISCKREGGNSLGVLWRRVMIGHPSNEDLQS 520

Query: 169 IINKLYPDLEAVAKNLIETYERIRSSHSHQLGASQ--------LFTRFSLRDLLKWCKRI 324
           I+   YP+LE VA  LI T+ER+     +QLG  Q          +RFSLRDLLKWCKRI
Sbjct: 521 IVKAWYPELEPVAGKLIGTFERVNYVPLYQLGGFQSGNHPSFSCLSRFSLRDLLKWCKRI 580

Query: 325 QSLGF 339
            +LGF
Sbjct: 581 AALGF 585


>ref|XP_004155970.1| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Cucumis sativus]
          Length = 5431

 Score =  101 bits (252), Expect = 6e-20
 Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 11/123 (8%)
 Frame = +1

Query: 4   NSYVAGSGEAISVSDSFRLFATMSSLTDDV----SGKSTLGVLWRRVLITPSTNEDLLLI 171
           N++  G GE I V+++FRLFAT+S+   D      G  T+G+LWR+V+I    NED+  I
Sbjct: 486 NTFSTGRGEEIRVAENFRLFATISAFRLDQFRNKEGGGTIGMLWRKVMIGSPNNEDMQSI 545

Query: 172 INKLYPDLEAVAKNLIETYERIRSSHSHQLG------ASQLF-TRFSLRDLLKWCKRIQS 330
           +   YP LE++A  L+ET E++ S     LG      AS  +  RFSLRDLLKWCKRI  
Sbjct: 546 VKTQYPILESIASKLVETLEKVNSCSQQLLGFRCEESASVSYPNRFSLRDLLKWCKRIVG 605

Query: 331 LGF 339
           LGF
Sbjct: 606 LGF 608


>ref|XP_004141809.1| PREDICTED: midasin-like [Cucumis sativus]
          Length = 5062

 Score =  101 bits (252), Expect = 6e-20
 Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 11/123 (8%)
 Frame = +1

Query: 4   NSYVAGSGEAISVSDSFRLFATMSSLTDDV----SGKSTLGVLWRRVLITPSTNEDLLLI 171
           N++  G GE I V+++FRLFAT+S+   D      G  T+G+LWR+V+I    NED+  I
Sbjct: 64  NTFSTGRGEEIRVAENFRLFATISAFRLDQFRNKEGGGTIGMLWRKVMIGSPNNEDMQSI 123

Query: 172 INKLYPDLEAVAKNLIETYERIRSSHSHQLG------ASQLF-TRFSLRDLLKWCKRIQS 330
           +   YP LE++A  L+ET E++ S     LG      AS  +  RFSLRDLLKWCKRI  
Sbjct: 124 VKTQYPILESIASKLVETLEKVNSCSQQLLGFRCEESASVSYPNRFSLRDLLKWCKRIVG 183

Query: 331 LGF 339
           LGF
Sbjct: 184 LGF 186


>gb|AFW78379.1| hypothetical protein ZEAMMB73_262445 [Zea mays]
          Length = 2767

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 12/120 (10%)
 Frame = +1

Query: 1   ANSYVAGSGEAISVSDSFRLFATMSSLTDDVS----GKSTLGVLWRRVLITPSTNEDLLL 168
           +N++  G  EA+ V++SFR FAT+++  +DVS    G+ T   LWR+V++      D++ 
Sbjct: 63  SNTFSVGHAEAVEVAESFRFFATVTTSKNDVSHDLPGRLTFSALWRKVMVGEPNQSDMVN 122

Query: 169 IINKLYPDLEAVAKNLIETYERIRSSHSHQLGASQL--------FTRFSLRDLLKWCKRI 324
           II   YP LE ++  LI+T+E++ S  S+Q G+  L          RFSLRDLLKWCKRI
Sbjct: 123 IIKGCYPSLEPISSKLIDTFEKVNSLGSYQFGSLNLAGGLSDGVLHRFSLRDLLKWCKRI 182


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
           gi|223539440|gb|EEF41030.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 5282

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 12/125 (9%)
 Frame = +1

Query: 1   ANSYVAGSGEAISVSDSFRLFATMSSLTDD----VSGKSTLGVLWRRVLITPSTNEDLLL 168
           A+ ++ G GE I+V +SFRLF+T+S+   D      G ++L +LWRRV+I    N+DL  
Sbjct: 450 ASFFITGHGEEITVPESFRLFSTISTSKIDGFCSKEGGNSLSILWRRVMIGLPNNDDLHN 509

Query: 169 IINKLYPDLEAVAKNLIETYERIRSSHSH-----QLGASQLF---TRFSLRDLLKWCKRI 324
           I+   YP+LE +A+ LI T+ER+ S   H     Q G+  L    +RFS+RDLLKWCKRI
Sbjct: 510 IVKARYPNLEPLARKLIGTFERVNSVCLHHILEFQTGSFTLSGSQSRFSIRDLLKWCKRI 569

Query: 325 QSLGF 339
             LG+
Sbjct: 570 AGLGY 574


Top