BLASTX nr result

ID: Coptis21_contig00033523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033523
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   114   8e-24
emb|CBI22982.3| unnamed protein product [Vitis vinifera]              114   8e-24
emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]   114   8e-24
ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
dbj|BAB10093.1| unnamed protein product [Arabidopsis thaliana]         83   3e-14

>ref|XP_003631953.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group I protein-like
            [Vitis vinifera]
          Length = 1427

 Score =  114 bits (285), Expect = 8e-24
 Identities = 64/138 (46%), Positives = 91/138 (65%)
 Frame = -1

Query: 423  AFSNALSKIRKLLRTGNLKDIVGQCQDSDLQSLKEDKSSYLASILSGIIEVLLNVIATEL 244
            +F++AL KIR+ LR GN++DI GQ QD+  ++ +++KS   A ILSGI+EVLLN IATE+
Sbjct: 681  SFTSALLKIRQCLRRGNMEDIFGQTQDTVSRTSEDEKSRCCALILSGIVEVLLNTIATEM 740

Query: 243  EKAADVKKVDLEKELIDFIDMHDSLESNACAAKQGSNLKRATSRDTPQDALDKSDRDSKE 64
            EKA D++KVDL KELIDF++ +D L+ +   ++Q + +KR   R    D  D +D     
Sbjct: 741  EKATDIEKVDLLKELIDFVNHYDFLKKSRSTSRQRNGIKRGNLRTAVHDIPDSTDLG--- 797

Query: 63   CIRSRSVILYQARKPFLA 10
                  + L QAR PFLA
Sbjct: 798  -----HMTLSQARIPFLA 810


>emb|CBI22982.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  114 bits (285), Expect = 8e-24
 Identities = 64/138 (46%), Positives = 91/138 (65%)
 Frame = -1

Query: 423  AFSNALSKIRKLLRTGNLKDIVGQCQDSDLQSLKEDKSSYLASILSGIIEVLLNVIATEL 244
            +F++AL KIR+ LR GN++DI GQ QD+  ++ +++KS   A ILSGI+EVLLN IATE+
Sbjct: 649  SFTSALLKIRQCLRRGNMEDIFGQTQDTVSRTSEDEKSRCCALILSGIVEVLLNTIATEM 708

Query: 243  EKAADVKKVDLEKELIDFIDMHDSLESNACAAKQGSNLKRATSRDTPQDALDKSDRDSKE 64
            EKA D++KVDL KELIDF++ +D L+ +   ++Q + +KR   R    D  D +D     
Sbjct: 709  EKATDIEKVDLLKELIDFVNHYDFLKKSRSTSRQRNGIKRGNLRTAVHDIPDSTDLG--- 765

Query: 63   CIRSRSVILYQARKPFLA 10
                  + L QAR PFLA
Sbjct: 766  -----HMTLSQARIPFLA 778


>emb|CAN81002.1| hypothetical protein VITISV_006993 [Vitis vinifera]
          Length = 1413

 Score =  114 bits (285), Expect = 8e-24
 Identities = 64/138 (46%), Positives = 91/138 (65%)
 Frame = -1

Query: 423  AFSNALSKIRKLLRTGNLKDIVGQCQDSDLQSLKEDKSSYLASILSGIIEVLLNVIATEL 244
            +F++AL KIR+ LR GN++DI GQ QD+  ++ +++KS   A ILSGI+EVLLN IATE+
Sbjct: 691  SFTSALLKIRQCLRRGNMEDIFGQTQDTVSRTSEDEKSRCCALILSGIVEVLLNTIATEM 750

Query: 243  EKAADVKKVDLEKELIDFIDMHDSLESNACAAKQGSNLKRATSRDTPQDALDKSDRDSKE 64
            EKA D++KVDL KELIDF++ +D L+ +   ++Q + +KR   R    D  D +D     
Sbjct: 751  EKATDIEKVDLLKELIDFVNHYDFLKKSRSTSRQRNGIKRGNLRTAVHDIPDSTDLG--- 807

Query: 63   CIRSRSVILYQARKPFLA 10
                  + L QAR PFLA
Sbjct: 808  -----HMTLSQARIPFLA 820


>ref|XP_002315511.1| predicted protein [Populus trichocarpa] gi|222864551|gb|EEF01682.1|
            predicted protein [Populus trichocarpa]
          Length = 1406

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/106 (46%), Positives = 73/106 (68%)
 Frame = -1

Query: 423  AFSNALSKIRKLLRTGNLKDIVGQCQDSDLQSLKEDKSSYLASILSGIIEVLLNVIATEL 244
            +FSNAL KI+K L+  NL+D + + Q     S++E+K    A IL+GI+EV++N IAT L
Sbjct: 703  SFSNALLKIQKFLKKINLEDFLSRIQGDSSTSVQEEKRKCCALILAGILEVVVNTIATRL 762

Query: 243  EKAADVKKVDLEKELIDFIDMHDSLESNACAAKQGSNLKRATSRDT 106
             KA D++KVDLEKEL+ F+++H+SLE + C  +  + +KR   R T
Sbjct: 763  NKATDIEKVDLEKELVGFVNLHESLEKDLC-TRLSTGIKRGNVRAT 807


>dbj|BAB10093.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1487

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/100 (46%), Positives = 64/100 (64%)
 Frame = -1

Query: 423  AFSNALSKIRKLLRTGNLKDIVGQCQDSDLQSLKEDKSSYLASILSGIIEVLLNVIATEL 244
            A+S+AL KIR  L    L DIVGQ QD+   SL+EDK      I+ GI++VLLN I  +L
Sbjct: 724  AYSSALVKIRSFLLGKKLGDIVGQSQDTVSASLEEDKRKSYCLIILGIVQVLLNYIIVDL 783

Query: 243  EKAADVKKVDLEKELIDFIDMHDSLESNACAAKQGSNLKR 124
            EK  + KK  + KE++D ID+++SLE +   +KQ +  KR
Sbjct: 784  EKQPEGKKGSVRKEIVDLIDLYESLEKDVGKSKQSNVGKR 823


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