BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033510
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631864.1| PREDICTED: riboflavin biosynthesis protein R...   104   7e-21
emb|CAN60371.1| hypothetical protein VITISV_041263 [Vitis vinifera]   104   7e-21
ref|XP_002514838.1| riboflavin-specific deaminase, putative [Ric...    96   2e-18
ref|XP_003624183.1| Swarming motility protein ybiA [Medicago tru...    96   4e-18
ref|XP_002325472.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16

>ref|XP_003631864.1| PREDICTED: riboflavin biosynthesis protein RibD-like [Vitis
           vinifera] gi|297735254|emb|CBI17616.3| unnamed protein
           product [Vitis vinifera]
          Length = 586

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
 Frame = -3

Query: 213 ATAFSPAIICKA---NNHNHTLEANYIKRAAEIADKSAGFTSPHPNFGCVIAAGNNVVGE 43
           A +F   IICKA   NNH H L++ +++RAAEIADKSAGFTSPHPNFGCVIA    VVGE
Sbjct: 2   AASFPSPIICKATTNNNHPHALDSFHVRRAAEIADKSAGFTSPHPNFGCVIATAGKVVGE 61

Query: 42  GFLYAQGTKCAELQ 1
           G+LYAQGTK AE+Q
Sbjct: 62  GYLYAQGTKPAEVQ 75


>emb|CAN60371.1| hypothetical protein VITISV_041263 [Vitis vinifera]
          Length = 587

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
 Frame = -3

Query: 213 ATAFSPAIICKA---NNHNHTLEANYIKRAAEIADKSAGFTSPHPNFGCVIAAGNNVVGE 43
           A +F   IICKA   NNH H L++ +++RAAEIADKSAGFTSPHPNFGCVIA    VVGE
Sbjct: 2   AASFPSPIICKATTNNNHPHALDSFHVRRAAEIADKSAGFTSPHPNFGCVIATAGKVVGE 61

Query: 42  GFLYAQGTKCAELQ 1
           G+LYAQGTK AE+Q
Sbjct: 62  GYLYAQGTKPAEVQ 75


>ref|XP_002514838.1| riboflavin-specific deaminase, putative [Ricinus communis]
           gi|223545889|gb|EEF47392.1| riboflavin-specific
           deaminase, putative [Ricinus communis]
          Length = 600

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
 Frame = -3

Query: 231 AFSIAAATAFSPAIICKA----------NNHNHTLEANYIKRAAEIADKSAGFTSPHPNF 82
           +FS+A     S  +IC A          NNH+H  +A +IKRAAE+ADKSAG TSPHPNF
Sbjct: 2   SFSLATNCYCSSPVICNAILNYNNNNHRNNHSHCSDAAFIKRAAELADKSAGCTSPHPNF 61

Query: 81  GCVIA-AGNNVVGEGFLYAQGTKCAELQ 1
           GCVIA A  NV GEG+LYAQGTK AE+Q
Sbjct: 62  GCVIATATGNVAGEGYLYAQGTKPAEVQ 89


>ref|XP_003624183.1| Swarming motility protein ybiA [Medicago truncatula]
           gi|355499198|gb|AES80401.1| Swarming motility protein
           ybiA [Medicago truncatula]
          Length = 1648

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
 Frame = -3

Query: 222 IAAATAFSPAII-CKANN--HNHTLEANYIKRAAEIADKSAGFTSPHPNFGCVIAA-GNN 55
           IA   +FS  I  CKA+N  HNH L+A YI+RAA IADKSAGFTSPHPNFGCVIA    +
Sbjct: 7   IANTFSFSSIICKCKASNDTHNHALDAGYIRRAALIADKSAGFTSPHPNFGCVIATPSGD 66

Query: 54  VVGEGFLYAQGTKCAELQ 1
           V GEG+LYAQGT  AE+Q
Sbjct: 67  VAGEGYLYAQGTSPAEVQ 84


>ref|XP_002325472.1| predicted protein [Populus trichocarpa] gi|222862347|gb|EEE99853.1|
           predicted protein [Populus trichocarpa]
          Length = 592

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 8/83 (9%)
 Frame = -3

Query: 228 FSIAAATAFSPAIICKA----NNHNH---TLEANYIKRAAEIADKSAGFTSPHPNFGCVI 70
           FS   +  +S  I+CK+    +NH+H   +L+A YIKRAA+IAD SAGF+SPHPNFGCVI
Sbjct: 4   FSGTKSYFYSSPILCKSIASNSNHSHAAHSLDAAYIKRAAQIADNSAGFSSPHPNFGCVI 63

Query: 69  AAGNNVV-GEGFLYAQGTKCAEL 4
           A  + +V GEG+LYAQGTK AE+
Sbjct: 64  ATTSGIVAGEGYLYAQGTKAAEV 86