BLASTX nr result

ID: Coptis21_contig00033498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033498
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602077.1| 4-coumarate-coa ligase [Medicago truncatula]...   134   6e-30
ref|XP_003523137.1| PREDICTED: 4-coumarate--CoA ligase-like 9-li...   132   2e-29
ref|XP_002318708.1| acyl:coa ligase [Populus trichocarpa] gi|222...   130   1e-28
ref|XP_002318707.1| 4-coumarate-coa ligase [Populus trichocarpa]...   130   1e-28
ref|XP_002511221.1| AMP dependent CoA ligase, putative [Ricinus ...   129   2e-28

>ref|XP_003602077.1| 4-coumarate-coa ligase [Medicago truncatula]
           gi|355491125|gb|AES72328.1| 4-coumarate-coa ligase
           [Medicago truncatula]
          Length = 562

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/104 (62%), Positives = 85/104 (81%), Gaps = 1/104 (0%)
 Frame = -3

Query: 316 IRAVAMGETAVLMGRFDFEGMLKAVETHQVTYMPASPPLVVAFAKLALVEKYNLSSLLMV 137
           +RA+AMGET VLM RFDFEGMLKAVE +++TYMP SPPL+ AF K  LV+KY++SS+ ++
Sbjct: 267 VRALAMGETLVLMQRFDFEGMLKAVEKYRITYMPVSPPLITAFTKSELVKKYDISSIRLL 326

Query: 136 ECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEA-AGVATMLGSD 8
             GGAPLGKEV+  F ++FP+++IVQGYGLTE+  G A M+G D
Sbjct: 327 GSGGAPLGKEVAESFKAKFPNVEIVQGYGLTESGGGAARMIGFD 370


>ref|XP_003523137.1| PREDICTED: 4-coumarate--CoA ligase-like 9-like [Glycine max]
          Length = 580

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/104 (64%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
 Frame = -3

Query: 316 IRAVAMGETAVLMGRFDFEGMLKAVETHQVTYMPASPPLVVAFAKLALVEKYNLSSLLMV 137
           +RA+A+GET V M RFDFEGMLKAVE + +TYMP SPPLVVA AK  LV+KY+LSSL  +
Sbjct: 285 VRAIAVGETLVFMQRFDFEGMLKAVERYGITYMPVSPPLVVALAKSELVKKYDLSSLRYL 344

Query: 136 ECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEA-AGVATMLGSD 8
            CGGAPLGKEV+  F  +FP+++I QGYGLTE+  G A +LG D
Sbjct: 345 GCGGAPLGKEVADDFRGKFPNVEIGQGYGLTESGGGAARVLGPD 388


>ref|XP_002318708.1| acyl:coa ligase [Populus trichocarpa] gi|222859381|gb|EEE96928.1|
           acyl:coa ligase [Populus trichocarpa]
          Length = 550

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/107 (63%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
 Frame = -3

Query: 319 SIRAVAMGETAVLMGRFDFEGMLKAVETHQVTYMPASPPLVVAFAKLALVEKYNLSSLLM 140
           SI A + GET VLM RFDF  MLK VE ++VTYMP SPPL+VAF K  L EKY+LSSL  
Sbjct: 254 SINAFSRGETLVLMERFDFVQMLKHVEKYRVTYMPVSPPLIVAFVKSDLTEKYDLSSLRS 313

Query: 139 VECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEAAGVAT-MLGSDGT 2
           + CGGAPLGKEV+ KF  +FPH++IVQGYGLTE  G A+  LG + T
Sbjct: 314 LGCGGAPLGKEVADKFKEKFPHVEIVQGYGLTETGGGASRTLGPEET 360


>ref|XP_002318707.1| 4-coumarate-coa ligase [Populus trichocarpa]
           gi|222859380|gb|EEE96927.1| 4-coumarate-coa ligase
           [Populus trichocarpa]
          Length = 548

 Score =  130 bits (327), Expect = 1e-28
 Identities = 68/107 (63%), Positives = 80/107 (74%), Gaps = 1/107 (0%)
 Frame = -3

Query: 319 SIRAVAMGETAVLMGRFDFEGMLKAVETHQVTYMPASPPLVVAFAKLALVEKYNLSSLLM 140
           SI A + GET VLM RFDF  MLK VE ++VTYMP SPPL+VAF K  L EKY+LSSL  
Sbjct: 252 SINAFSRGETLVLMERFDFVQMLKHVEKYRVTYMPVSPPLIVAFVKSDLTEKYDLSSLRS 311

Query: 139 VECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEAAGVAT-MLGSDGT 2
           + CGGAPLGKEV+ KF  +FPH++IVQGYGLTE  G A+  LG + T
Sbjct: 312 LGCGGAPLGKEVADKFKEKFPHVEIVQGYGLTETGGGASRTLGPEET 358


>ref|XP_002511221.1| AMP dependent CoA ligase, putative [Ricinus communis]
           gi|223550336|gb|EEF51823.1| AMP dependent CoA ligase,
           putative [Ricinus communis]
          Length = 549

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/100 (62%), Positives = 77/100 (77%)
 Frame = -3

Query: 316 IRAVAMGETAVLMGRFDFEGMLKAVETHQVTYMPASPPLVVAFAKLALVEKYNLSSLLMV 137
           +RA AMGET VLM RFDFEGML+AVE ++V +MP SPPL+VA  K  L +KY+LSSLL +
Sbjct: 254 VRAFAMGETVVLMERFDFEGMLRAVEKYKVAFMPVSPPLIVALVKSDLTKKYDLSSLLFL 313

Query: 136 ECGGAPLGKEVSCKFVSRFPHIQIVQGYGLTEAAGVATML 17
            CGGAPLGK+VS +F  +FP ++I QGYGLTE  G A  +
Sbjct: 314 GCGGAPLGKDVSDRFKDKFPQVEISQGYGLTETGGGAARM 353


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