BLASTX nr result

ID: Coptis21_contig00033369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033369
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80250.1| hypothetical protein VITISV_036640 [Vitis vinifera]   154   7e-36
ref|XP_003633213.1| PREDICTED: probable xyloglucan endotransgluc...   152   3e-35
ref|XP_003633211.1| PREDICTED: LOW QUALITY PROTEIN: probable xyl...   152   4e-35
ref|XP_002270299.1| PREDICTED: probable xyloglucan endotransgluc...   151   5e-35
ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransgluc...   151   6e-35

>emb|CAN80250.1| hypothetical protein VITISV_036640 [Vitis vinifera]
          Length = 287

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/83 (90%), Positives = 79/83 (95%)
 Frame = -2

Query: 251 TILVVAFAGNLNQDFDITWGDGRAKILNNGELLTLSLDKASGSGFQSKNEYLFGKIDMQL 72
           ++ VVA AGN NQDFDITWGDGRAKILNNG+LLTLSLDKASGSGFQS+NEYLFGKIDMQL
Sbjct: 12  SMXVVASAGNFNQDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSRNEYLFGKIDMQL 71

Query: 71  KLVSGNSAGTVTAYYLSSQGPTH 3
           KLV GNSAGTVTAYYLSSQGPTH
Sbjct: 72  KLVPGNSAGTVTAYYLSSQGPTH 94


>ref|XP_003633213.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23-like [Vitis vinifera]
          Length = 345

 Score =  152 bits (384), Expect = 3e-35
 Identities = 75/84 (89%), Positives = 77/84 (91%)
 Frame = -2

Query: 254 ATILVVAFAGNLNQDFDITWGDGRAKILNNGELLTLSLDKASGSGFQSKNEYLFGKIDMQ 75
           A+ L+ A AGN  QDFDITWGDGRAKILNNGELLTLSLDK SGSGFQSKNEYLFGKIDMQ
Sbjct: 21  ASFLMAASAGNFYQDFDITWGDGRAKILNNGELLTLSLDKTSGSGFQSKNEYLFGKIDMQ 80

Query: 74  LKLVSGNSAGTVTAYYLSSQGPTH 3
           LKLV GNSAGTVTAYYLSSQGPTH
Sbjct: 81  LKLVPGNSAGTVTAYYLSSQGPTH 104


>ref|XP_003633211.1| PREDICTED: LOW QUALITY PROTEIN: probable xyloglucan
           endotransglucosylase/hydrolase protein 23-like [Vitis
           vinifera]
          Length = 310

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/83 (89%), Positives = 77/83 (92%)
 Frame = -2

Query: 251 TILVVAFAGNLNQDFDITWGDGRAKILNNGELLTLSLDKASGSGFQSKNEYLFGKIDMQL 72
           + L+ A AGN NQDFDITWGDGRAKILN+GELLTLSLDK SGSGFQSKNEYLFGKIDMQL
Sbjct: 22  SFLMAASAGNFNQDFDITWGDGRAKILNSGELLTLSLDKTSGSGFQSKNEYLFGKIDMQL 81

Query: 71  KLVSGNSAGTVTAYYLSSQGPTH 3
           KLV GNSAGTVTAYYLSSQGPTH
Sbjct: 82  KLVPGNSAGTVTAYYLSSQGPTH 104


>ref|XP_002270299.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera]
          Length = 285

 Score =  151 bits (382), Expect = 5e-35
 Identities = 74/83 (89%), Positives = 78/83 (93%)
 Frame = -2

Query: 251 TILVVAFAGNLNQDFDITWGDGRAKILNNGELLTLSLDKASGSGFQSKNEYLFGKIDMQL 72
           ++LVVA  GN NQDFDITWGDGRAKILNNG+LLTLSLDKASGSGFQS+NEYLFGKIDMQL
Sbjct: 12  SMLVVASGGNFNQDFDITWGDGRAKILNNGQLLTLSLDKASGSGFQSRNEYLFGKIDMQL 71

Query: 71  KLVSGNSAGTVTAYYLSSQGPTH 3
           KLVSGNSAGTVTAYYLSSQG  H
Sbjct: 72  KLVSGNSAGTVTAYYLSSQGSAH 94


>ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera]
          Length = 296

 Score =  151 bits (381), Expect = 6e-35
 Identities = 74/80 (92%), Positives = 76/80 (95%)
 Frame = -2

Query: 242 VVAFAGNLNQDFDITWGDGRAKILNNGELLTLSLDKASGSGFQSKNEYLFGKIDMQLKLV 63
           VVA  GNL QDFD+TWGDGRAKILNNG+LLTLSLDKASGSGFQSKNEYLFGKIDMQLKLV
Sbjct: 24  VVASVGNLYQDFDLTWGDGRAKILNNGQLLTLSLDKASGSGFQSKNEYLFGKIDMQLKLV 83

Query: 62  SGNSAGTVTAYYLSSQGPTH 3
            GNSAGTVTAYYLSSQGPTH
Sbjct: 84  PGNSAGTVTAYYLSSQGPTH 103


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