BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033306
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like...    87   2e-15
emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]    87   2e-15
ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like ...    63   3e-08
ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like ...    56   3e-06

>ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like [Vitis vinifera]
          Length = 304

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/116 (43%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +2

Query: 2   DSPDFPTNVLFWGNQTLLSTRTIGQEEVXXXXXXXXXXXXXXLRRDGALMIEIPSLT-DG 178
           +SP++PTN+LFWGNQT +++  +  EE                  DG L+I+IP  T + 
Sbjct: 185 ESPNYPTNILFWGNQTRVTSAGLCLEEGAASSQPPCASPGNG--PDGMLVIDIPRQTAEN 242

Query: 179 FSSLSPLPSRFTEEEMKSPMTTXXXXXXXXXXXDKRPIPCSPSFVDVELGEGGRGQ 346
           FSSLSP     +EEE+KSPMTT           +KR +PCSP  VDVE  +GGRGQ
Sbjct: 243 FSSLSPSTGGTSEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSVDVE--QGGRGQ 296


>emb|CAN79606.1| hypothetical protein VITISV_027500 [Vitis vinifera]
          Length = 959

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 51/116 (43%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +2

Query: 2   DSPDFPTNVLFWGNQTLLSTRTIGQEEVXXXXXXXXXXXXXXLRRDGALMIEIPSLT-DG 178
           +SP++PTN+LFWGNQT +++  +  EE                  DG L+I+IP  T + 
Sbjct: 185 ESPNYPTNILFWGNQTRVTSAGLCLEEGAASSQPPCASPGNG--PDGMLVIDIPRQTAEN 242

Query: 179 FSSLSPLPSRFTEEEMKSPMTTXXXXXXXXXXXDKRPIPCSPSFVDVELGEGGRGQ 346
           FSSLSP     +EEE+KSPMTT           +KR +PCSP  VDVE  +GGRGQ
Sbjct: 243 FSSLSPSTGGTSEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSVDVE--QGGRGQ 296


>ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 314

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 46/121 (38%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
 Frame = +2

Query: 11  DFPTNVLFWGNQTLLSTRTIGQEEVXXXXXXXXXXXXXXL-----------------RRD 139
           +FPTNVL WGNQT +S+  +  EE                                 R  
Sbjct: 191 NFPTNVLVWGNQTQVSSIGVSLEEKEEEEEEGTSQSQQPPCSTPPTASSSASSNVNGRCH 250

Query: 140 GALMIEIPSLTDGFSSLSPLPSRFTEEEMKSPMTTXXXXXXXXXXXDKRPIPCSPSFVDV 319
           G L+I+IPS     SSLSP  SR  EEE+KSPM             DK+  PCSPS VDV
Sbjct: 251 GMLVIDIPSECTS-SSLSPSGSRCAEEEVKSPMAATLRSFKRLLSRDKKLSPCSPSSVDV 309

Query: 320 E 322
           E
Sbjct: 310 E 310


>ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 319

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 42/126 (33%), Positives = 54/126 (42%), Gaps = 22/126 (17%)
 Frame = +2

Query: 11  DFPTNVLFWGNQTLLSTRTIGQEEVXXXXXXXXXXXXXXL-------------------- 130
           +FPTNVL WGNQT +S+  +  E+                                    
Sbjct: 191 NFPTNVLVWGNQTQVSSFGVSLEDSLEEKQEQGTSQCQQPPPCSPSPTPSSSSSSARGNV 250

Query: 131 --RRDGALMIEIPSLTDGFSSLSPLPSRFTEEEMKSPMTTXXXXXXXXXXXDKRPIPCSP 304
             R  G L+I+IP+     SSLSP  SR  E+E+KSPM             +K+  PCSP
Sbjct: 251 NGRCHGMLVIDIPNECTS-SSLSPSGSRCAEDEVKSPMAVTLRSFKRLLSREKKLSPCSP 309

Query: 305 SFVDVE 322
           S VDVE
Sbjct: 310 SSVDVE 315