BLASTX nr result

ID: Coptis21_contig00033256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033256
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090...   214   1e-53
emb|CBI27076.3| unnamed protein product [Vitis vinifera]              214   1e-53
ref|NP_173934.2| P-loop containing nucleoside triphosphate hydro...   209   4e-52
ref|XP_003518689.1| PREDICTED: uncharacterized protein At1g26090...   208   8e-52
gb|AFK38663.1| unknown [Medicago truncatula]                          207   2e-51

>ref|XP_002278585.1| PREDICTED: uncharacterized protein At1g26090, chloroplastic-like
           [Vitis vinifera]
          Length = 441

 Score =  214 bits (544), Expect = 1e-53
 Identities = 113/181 (62%), Positives = 133/181 (73%), Gaps = 3/181 (1%)
 Frame = -3

Query: 535 AVGSTGSS---NTTRLVTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVIHSQDPTVEYLM 365
           A+ +T SS   ++T+LVTFLGKGGSGKTTSA+ AAQ YA  G  TCLVIHSQDPT EYL+
Sbjct: 29  ALATTASSEEDHSTKLVTFLGKGGSGKTTSAIFAAQHYAMTGFNTCLVIHSQDPTAEYLL 88

Query: 364 GCKIGTSPTVCKSNLSVVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXXXLPG 185
            CKIGTSP +C +NLS VRLETTKMLL PL+ LK+ADA L +TQ             LPG
Sbjct: 89  NCKIGTSPIICNNNLSAVRLETTKMLLEPLHLLKKADAELNITQGVLEGVVGEELGVLPG 148

Query: 184 MDSIFAALELNQFVGFLGMTATKRNQPQSKFDIIIYDGISNEETLRMIGMTEKARWYLKY 5
           MDS+F  L L + VGFLG    +RN  + K+DIIIYDGI+ EETLRMIG+T +AR YLKY
Sbjct: 149 MDSVFTLLALERLVGFLG-NLGRRNLRKDKYDIIIYDGINTEETLRMIGVTSRARLYLKY 207

Query: 4   L 2
           L
Sbjct: 208 L 208


>emb|CBI27076.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  214 bits (544), Expect = 1e-53
 Identities = 113/181 (62%), Positives = 133/181 (73%), Gaps = 3/181 (1%)
 Frame = -3

Query: 535 AVGSTGSS---NTTRLVTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVIHSQDPTVEYLM 365
           A+ +T SS   ++T+LVTFLGKGGSGKTTSA+ AAQ YA  G  TCLVIHSQDPT EYL+
Sbjct: 29  ALATTASSEEDHSTKLVTFLGKGGSGKTTSAIFAAQHYAMTGFNTCLVIHSQDPTAEYLL 88

Query: 364 GCKIGTSPTVCKSNLSVVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXXXLPG 185
            CKIGTSP +C +NLS VRLETTKMLL PL+ LK+ADA L +TQ             LPG
Sbjct: 89  NCKIGTSPIICNNNLSAVRLETTKMLLEPLHLLKKADAELNITQGVLEGVVGEELGVLPG 148

Query: 184 MDSIFAALELNQFVGFLGMTATKRNQPQSKFDIIIYDGISNEETLRMIGMTEKARWYLKY 5
           MDS+F  L L + VGFLG    +RN  + K+DIIIYDGI+ EETLRMIG+T +AR YLKY
Sbjct: 149 MDSVFTLLALERLVGFLG-NLGRRNLRKDKYDIIIYDGINTEETLRMIGVTSRARLYLKY 207

Query: 4   L 2
           L
Sbjct: 208 L 208


>ref|NP_173934.2| P-loop containing nucleoside triphosphate hydrolase-like protein
           [Arabidopsis thaliana]
           gi|75323193|sp|Q6DYE4.1|Y1609_ARATH RecName:
           Full=Uncharacterized protein At1g26090, chloroplastic;
           Flags: Precursor gi|49617729|gb|AAT67560.1| hypothetical
           protein At1G26090 [Arabidopsis thaliana]
           gi|67633392|gb|AAY78621.1| hypothetical protein
           At1g26090 [Arabidopsis thaliana]
           gi|332192526|gb|AEE30647.1| P-loop containing nucleoside
           triphosphate hydrolase-like protein [Arabidopsis
           thaliana]
          Length = 455

 Score =  209 bits (532), Expect = 4e-52
 Identities = 110/172 (63%), Positives = 126/172 (73%)
 Frame = -3

Query: 517 SSNTTRLVTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVIHSQDPTVEYLMGCKIGTSPT 338
           S   T+ VTFLGKGGSGKTT+AV AAQ YA AGL TCLVIH+QDP+ E+L+G KIGTSPT
Sbjct: 54  SQKLTKFVTFLGKGGSGKTTAAVFAAQHYALAGLSTCLVIHNQDPSAEFLLGSKIGTSPT 113

Query: 337 VCKSNLSVVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXXXLPGMDSIFAALE 158
           +   NLSV+RLETTKMLL PL QLKQADARL +TQ             LPGMDSIF+ LE
Sbjct: 114 LINDNLSVIRLETTKMLLEPLKQLKQADARLNMTQGVLEGVVGEELGVLPGMDSIFSMLE 173

Query: 157 LNQFVGFLGMTATKRNQPQSKFDIIIYDGISNEETLRMIGMTEKARWYLKYL 2
           L + VGF    AT++N     FD+IIYDGIS EETLRMIG++ K R Y KYL
Sbjct: 174 LERLVGFF-RQATRKNHKGKPFDVIIYDGISTEETLRMIGLSSKTRLYAKYL 224


>ref|XP_003518689.1| PREDICTED: uncharacterized protein At1g26090, chloroplastic-like
           [Glycine max]
          Length = 442

 Score =  208 bits (529), Expect = 8e-52
 Identities = 111/176 (63%), Positives = 127/176 (72%)
 Frame = -3

Query: 529 GSTGSSNTTRLVTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVIHSQDPTVEYLMGCKIG 350
           G   SS+ T+L+TFLGKGGSGKTT+A+LAAQ YA AGL TCLVIH QD T +YL+ CKIG
Sbjct: 35  GGATSSSATKLLTFLGKGGSGKTTAAILAAQHYAMAGLNTCLVIHGQDTTADYLLNCKIG 94

Query: 349 TSPTVCKSNLSVVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXXXLPGMDSIF 170
           TS   C  NLS VRLETTKMLL PL  LKQADA+L +TQ             LPGMDSIF
Sbjct: 95  TSHVTCGKNLSAVRLETTKMLLEPLKLLKQADAQLNMTQGTLGGIVGEELGILPGMDSIF 154

Query: 169 AALELNQFVGFLGMTATKRNQPQSKFDIIIYDGISNEETLRMIGMTEKARWYLKYL 2
             L L + VGFL + A+K    Q KFD+IIYDGIS+EETLR+IG + KAR YLKYL
Sbjct: 155 LVLALERLVGFLRIAASK--SQQDKFDLIIYDGISSEETLRIIGASSKARLYLKYL 208


>gb|AFK38663.1| unknown [Medicago truncatula]
          Length = 440

 Score =  207 bits (526), Expect = 2e-51
 Identities = 111/185 (60%), Positives = 135/185 (72%), Gaps = 5/185 (2%)
 Frame = -3

Query: 541 IMAVGSTGSSNT-----TRLVTFLGKGGSGKTTSAVLAAQFYANAGLKTCLVIHSQDPTV 377
           +MAV S+ SS++     T+L+TFLGKGGSGKTT+A+ AAQ +A AGL TCLVIHSQD T 
Sbjct: 24  LMAVASSSSSSSEDVASTKLLTFLGKGGSGKTTAAIFAAQHFAMAGLNTCLVIHSQDITA 83

Query: 376 EYLMGCKIGTSPTVCKSNLSVVRLETTKMLLGPLNQLKQADARLKLTQXXXXXXXXXXXX 197
           +YL+ CKIGTS   C  NLS VRLETTKMLL PL  LKQADA+L +TQ            
Sbjct: 84  DYLLNCKIGTSYVECSKNLSAVRLETTKMLLEPLKLLKQADAQLNMTQGTLGGIVGEELG 143

Query: 196 XLPGMDSIFAALELNQFVGFLGMTATKRNQPQSKFDIIIYDGISNEETLRMIGMTEKARW 17
            LPGMDSIF+ L L + VGFLGM ++K    Q KFD+IIYDG+S+EETLR++G + KAR 
Sbjct: 144 ILPGMDSIFSVLALERLVGFLGMPSSK--SEQDKFDVIIYDGVSSEETLRIMGGSSKARL 201

Query: 16  YLKYL 2
           YLKY+
Sbjct: 202 YLKYI 206


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