BLASTX nr result

ID: Coptis21_contig00033245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033245
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267033.2| PREDICTED: uncharacterized protein LOC100244...   125   8e-27
ref|XP_004161027.1| PREDICTED: uncharacterized protein LOC101229...   122   7e-26
ref|XP_004144623.1| PREDICTED: uncharacterized protein LOC101212...   122   7e-26
ref|XP_002524597.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_002298691.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23

>ref|XP_002267033.2| PREDICTED: uncharacterized protein LOC100244248 [Vitis vinifera]
          Length = 1505

 Score =  125 bits (313), Expect = 8e-27
 Identities = 86/187 (45%), Positives = 105/187 (56%), Gaps = 24/187 (12%)
 Frame = +3

Query: 39  DELCNTGPDDETLIREKKRSRRVSF-AENTSVHVFDR--XXXXXXXXXXXXXXXPIQLLL 209
           +E CNT  ++ T+ R+KKRSRRVSF AE TSVHVF+R                   QL L
Sbjct: 7   EEQCNTETEEGTVARQKKRSRRVSFAAEITSVHVFNRDDECETPPESKPSSDCDTPQLGL 66

Query: 210 PQSK---------------------NNEDDDVSEEEQGPHPFFIENYSSPGSSALGSATS 326
           P +                       NEDDDV + +    PF      SPGS+ +GSA+S
Sbjct: 67  PDAPVLRFLKDLIDTTDDDDDDNGIENEDDDVHQRKSFLRPF---QSPSPGST-IGSASS 122

Query: 327 NDEENFFGPVSASFIRLGRRQSDLSVGSDDYDSNNHEMTLDSTAFSMHFQSLVRSDFGSN 506
           ND +NFFGPVSASFIR GR     S  SD+    NH++T+DSTAFSMHF+SL RSD G  
Sbjct: 123 NDADNFFGPVSASFIRPGRFSD--SAASDE----NHDITMDSTAFSMHFRSLARSDSGGE 176

Query: 507 VKTPTSV 527
           +KTPT V
Sbjct: 177 LKTPTGV 183


>ref|XP_004161027.1| PREDICTED: uncharacterized protein LOC101229377 [Cucumis sativus]
          Length = 1338

 Score =  122 bits (305), Expect = 7e-26
 Identities = 84/181 (46%), Positives = 104/181 (57%), Gaps = 15/181 (8%)
 Frame = +3

Query: 39  DELCNTGPDDETLIREKKRSRRVSFA--ENTSVHVFDR---XXXXXXXXXXXXXXXPIQL 203
           +E  NT  ++E+L  +KKR+RRVSFA  E TSVH+F R                  P   
Sbjct: 7   EETANTATEEESLAFKKKRARRVSFADREITSVHIFKRDEDYETPPEPQTTPEAALPDNE 66

Query: 204 LLPQSKNNEDDDVSEEEQ--------GPHPFFIE--NYSSPGSSALGSATSNDEENFFGP 353
           +L   ++  D D S E          G    F+      SPGS + GSATSNDEENFFGP
Sbjct: 67  VLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLRPLGSPSPGSISAGSATSNDEENFFGP 126

Query: 354 VSASFIRLGRRQSDLSVGSDDYDSNNHEMTLDSTAFSMHFQSLVRSDFGSNVKTPTSVES 533
           VSASFIR   R SD S  SDD    NH++T+DSTAFSMHF+SL  SD G ++KTPT++ S
Sbjct: 127 VSASFIR-PMRLSD-SAASDD----NHDVTMDSTAFSMHFRSLAESDSGRDLKTPTAIRS 180

Query: 534 G 536
           G
Sbjct: 181 G 181


>ref|XP_004144623.1| PREDICTED: uncharacterized protein LOC101212645 [Cucumis sativus]
          Length = 1338

 Score =  122 bits (305), Expect = 7e-26
 Identities = 84/181 (46%), Positives = 104/181 (57%), Gaps = 15/181 (8%)
 Frame = +3

Query: 39  DELCNTGPDDETLIREKKRSRRVSFA--ENTSVHVFDR---XXXXXXXXXXXXXXXPIQL 203
           +E  NT  ++E+L  +KKR+RRVSFA  E TSVH+F R                  P   
Sbjct: 7   EETANTATEEESLAFKKKRARRVSFADREITSVHIFKRDEDYETPPEPQTTPEAALPDNE 66

Query: 204 LLPQSKNNEDDDVSEEEQ--------GPHPFFIE--NYSSPGSSALGSATSNDEENFFGP 353
           +L   ++  D D S E          G    F+      SPGS + GSATSNDEENFFGP
Sbjct: 67  VLGFFRDLADSDDSRESSPNLDDDVLGQRKSFLRPLGSPSPGSISAGSATSNDEENFFGP 126

Query: 354 VSASFIRLGRRQSDLSVGSDDYDSNNHEMTLDSTAFSMHFQSLVRSDFGSNVKTPTSVES 533
           VSASFIR   R SD S  SDD    NH++T+DSTAFSMHF+SL  SD G ++KTPT++ S
Sbjct: 127 VSASFIR-PMRLSD-SAASDD----NHDVTMDSTAFSMHFRSLAESDSGRDLKTPTAIRS 180

Query: 534 G 536
           G
Sbjct: 181 G 181


>ref|XP_002524597.1| conserved hypothetical protein [Ricinus communis]
           gi|223536150|gb|EEF37805.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1277

 Score =  117 bits (294), Expect = 1e-24
 Identities = 84/201 (41%), Positives = 106/201 (52%), Gaps = 31/201 (15%)
 Frame = +3

Query: 36  EDELCNTGPDDETLIREKKRSRRVSFAEN--TSVHVFDRXXXXXXXXXXXXXXXPIQLLL 209
           E+ LCN+  D+ET+   KKRSRRVSFA+   TSVH+F+R                    +
Sbjct: 6   EEALCNSLTDEETVALRKKRSRRVSFADREITSVHIFNRDEDFETPPDSSSAKKQSSHSI 65

Query: 210 PQSKN-----------------------NEDDDVSEEEQGPHPFF--IENYSSPGSSALG 314
            +++N                       NEDDD          F   IE+ S   S+ +G
Sbjct: 66  SEAENEVIGFFRDLADSDDYKDMSPNDDNEDDDDDGAVTARKSFLRPIESPSPGSSTVVG 125

Query: 315 SATSNDEENFFGPVSASFIRLGRRQSDLSVGSDDYDSNNHEMTLDSTAFSMHFQSLVRSD 494
           SATSNDE+NFFGPVS SFIR  R  SD S  SDD    NH++T+DSTAFSMHF+SL RSD
Sbjct: 126 SATSNDEDNFFGPVSTSFIR-HRTLSD-SAASDD----NHDVTMDSTAFSMHFRSLARSD 179

Query: 495 FGSNV----KTPTSVESGPSG 545
            G N     KTP+ + +  SG
Sbjct: 180 SGGNTFIEEKTPSHITTPNSG 200


>ref|XP_002298691.1| predicted protein [Populus trichocarpa] gi|222845949|gb|EEE83496.1|
           predicted protein [Populus trichocarpa]
          Length = 1039

 Score =  114 bits (286), Expect = 1e-23
 Identities = 77/192 (40%), Positives = 101/192 (52%), Gaps = 23/192 (11%)
 Frame = +3

Query: 21  NTFILEDELCNTGPDDETLIREKKRSRRVSFAEN--TSVHVFDRXXXXXXXXXXXXXXXP 194
           N   +ED   N+  D+ET+   KKRSRRVSFA+   TSVH+F+R               P
Sbjct: 4   NPATIEDPSQNSNTDEETIALRKKRSRRVSFADREITSVHIFNRDDEYETPPDPPSTKSP 63

Query: 195 I---------------------QLLLPQSKNNEDDDVSEEEQGPHPFFIENYSSPGSSAL 311
           I                     ++  P   +++D+D S   +      +E+ S  GSS +
Sbjct: 64  ISDTDDEVRAFFGDLADSDDSKEISSPTGADDDDNDYSINSRKSFFRPVESPSPGGSSIV 123

Query: 312 GSATSNDEENFFGPVSASFIRLGRRQSDLSVGSDDYDSNNHEMTLDSTAFSMHFQSLVRS 491
           GSA  NDE+NFFGPVSASFIR GR       G+ D    N ++T+DSTAFSMH++SLVRS
Sbjct: 124 GSAYCNDEDNFFGPVSASFIRAGRLSDS---GASDC---NLDVTMDSTAFSMHYRSLVRS 177

Query: 492 DFGSNVKTPTSV 527
             G   KTPT V
Sbjct: 178 VSGEEFKTPTEV 189


Top