BLASTX nr result

ID: Coptis21_contig00033235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033235
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247...   115   3e-24
ref|XP_002530206.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
ref|XP_002300865.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_003519537.1| PREDICTED: uncharacterized protein LOC100818...    95   7e-18
ref|XP_003617375.1| hypothetical protein MTR_5g090900 [Medicago ...    94   1e-17

>ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247266 [Vitis vinifera]
           gi|302143518|emb|CBI22079.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score =  115 bits (289), Expect = 3e-24
 Identities = 68/164 (41%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
 Frame = -2

Query: 515 VNNSLRSPGNTGVESPDTDGQTSSYPSDNDSLFLTPELPALTNQCKNKSVRFECESNTVY 336
           ++N   S   + V + D        P D+    ++P L A   Q +N+SVRFECE++   
Sbjct: 179 ISNGQSSTEGSTVGNSDVVINVHPNPVDDSVPSVSPWLSAPNVQRRNRSVRFECEADAAL 238

Query: 335 LPSSGTSE-------KQTNSPGRHLELKDCPYPTPLVLTDEMQTPGTVYPISAENLGHRD 177
             S   S        K+  SP  H   K  PYPTPL L DE+QTPGTV+P S  NL +  
Sbjct: 239 FSSGSASSEIASQTSKRYESPSNHSVSKLSPYPTPLKLNDELQTPGTVFPASLGNLENGK 298

Query: 176 KGRIRSQYVNPTLNPVHNFSQLKALKEDAYYNHEGDDNQNESLE 45
             RIRSQYV   LNPV NFSQ  ALKE+  ++++   N  ESLE
Sbjct: 299 NARIRSQYVYSVLNPVENFSQWSALKEEGSHSNQFSSNMGESLE 342


>ref|XP_002530206.1| conserved hypothetical protein [Ricinus communis]
           gi|223530282|gb|EEF32180.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 461

 Score =  100 bits (249), Expect = 1e-19
 Identities = 63/150 (42%), Positives = 81/150 (54%)
 Frame = -2

Query: 491 GNTGVESPDTDGQTSSYPSDNDSLFLTPELPALTNQCKNKSVRFECESNTVYLPSSGTSE 312
           G+  V S  T     S   +   + ++    A     KNKSVRFEC  +T    S   + 
Sbjct: 146 GHGSVYSEQTPSSCISNAQNTARMSVSSVEDATNVPFKNKSVRFECNLDTSSSESGHLNM 205

Query: 311 KQTNSPGRHLELKDCPYPTPLVLTDEMQTPGTVYPISAENLGHRDKGRIRSQYVNPTLNP 132
           ++  SP   +  K  P PTPL ++DEMQTPGTV+P S E L +  K RIRSQYV+P L P
Sbjct: 206 RKFESPEDIIVSKPSPKPTPLKISDEMQTPGTVFPASLEILAN-GKTRIRSQYVHPLLKP 264

Query: 131 VHNFSQLKALKEDAYYNHEGDDNQNESLEQ 42
           V N SQ K L+ED   +H+G      SLEQ
Sbjct: 265 VENASQWKVLQEDDSSSHQGLSELKGSLEQ 294


>ref|XP_002300865.1| predicted protein [Populus trichocarpa] gi|222842591|gb|EEE80138.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 62/131 (47%), Positives = 79/131 (60%), Gaps = 6/131 (4%)
 Frame = -2

Query: 410 PELPALTNQCKNKSVRFECESNTVYLPSSGTSE------KQTNSPGRHLELKDCPYPTPL 249
           P L A   Q +N+SVRFEC+ +T    S G+SE      ++  SPG     K  P PTPL
Sbjct: 209 PWLSATKVQSRNRSVRFECDFDTS--SSKGSSENGCQVPRKYESPGNLSVSKPSPRPTPL 266

Query: 248 VLTDEMQTPGTVYPISAENLGHRDKGRIRSQYVNPTLNPVHNFSQLKALKEDAYYNHEGD 69
            ++D+MQTPGTV+P + E L +  K RIRSQYV   LNPV N SQ K L+ED   +HE  
Sbjct: 267 KISDDMQTPGTVFPANLETLAN-GKTRIRSQYVYSVLNPVENASQWKLLREDDSNSHE-Q 324

Query: 68  DNQNESLEQNE 36
             +  SLEQ+E
Sbjct: 325 SGELCSLEQSE 335


>ref|XP_003519537.1| PREDICTED: uncharacterized protein LOC100818713 [Glycine max]
          Length = 452

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/132 (42%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
 Frame = -2

Query: 416 LTPELPALTNQCKNKSVRFECESNTVYLPSSGTSE--KQTNSPGRHLELKDCPYPTPLVL 243
           L   L A   Q KNKSVRFE E++     SS  +   K+  SP      K  PYPTPL L
Sbjct: 215 LVSALLATNTQRKNKSVRFESETDLATYGSSSDNRHMKENKSPNNQSAYKPSPYPTPLKL 274

Query: 242 TDEMQTPGTVYPISAENLGHRDKGRIRSQYVNPTLNPVHNFSQLKALKEDAYYNHEGDDN 63
            DEMQTPGTVYP S E L H  + ++RSQ+V PT  P  N  + K LKE  +   E    
Sbjct: 275 FDEMQTPGTVYPASLEEL-HTGRAQVRSQFVYPTNKPGDNVLRCKILKERDFNPEEDSSE 333

Query: 62  QNESLEQNERGS 27
            ++ +E+ + G+
Sbjct: 334 LSDLVEKAQNGT 345


>ref|XP_003617375.1| hypothetical protein MTR_5g090900 [Medicago truncatula]
           gi|355518710|gb|AET00334.1| hypothetical protein
           MTR_5g090900 [Medicago truncatula]
          Length = 473

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 58/155 (37%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
 Frame = -2

Query: 479 VESPDTDGQTSSYPSDNDSLFLTPELPALTNQCKNKSVRFECESNTVYL--PSSGTSEKQ 306
           VE   T    ++Y +  +   +TP  PA   Q +NKSVRF+CE + V    P      K+
Sbjct: 189 VEGSWTRSIHTAYKTRKNEASVTP-WPAADTQKQNKSVRFKCECDLVSYQSPPDDWHMKK 247

Query: 305 TNSPGRHLELKDCPYPTPLVLTDEMQTPGTVYPISAENLGHRDKGRIRSQYVNPTLNPVH 126
             SP      K  PYPTPL L D+MQTPGTVYP S E+L +  K R+RSQ++ P  NP  
Sbjct: 248 NKSPDSQSACKQSPYPTPLKLFDDMQTPGTVYPTSLEDL-YDGKHRVRSQFIYPNCNPGQ 306

Query: 125 NFSQLKALKEDAYYNHEGDDNQNESLEQNERGSSA 21
           N    K L+E  +   +      +S+E+++  + A
Sbjct: 307 NIFLSKLLEEQVFNPEQDLSELGDSIERDQNQTPA 341


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