BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032970
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   357   1e-96
ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2...   354   1e-95
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...   351   8e-95
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   349   4e-94
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ...   348   9e-94

>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Glycine max]
          Length = 747

 Score =  357 bits (917), Expect = 1e-96
 Identities = 170/230 (73%), Positives = 198/230 (86%), Gaps = 6/230 (2%)
 Frame = -3

Query: 751  TCMIDLLSRAGRLQEAKEFIE*MPFQPDAIGWATLLSSCRLHCNVEIGEWTADSLVKVEP 572
            TCMIDL SRAGRL+EA++FI  MPF PDAIGWA+LLSSCR H N+EIG+W A+SL+K+EP
Sbjct: 516  TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEP 575

Query: 571  HNPASYVLLSKIYAAKRKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIFSADDRSNQ 392
            HN ASY+LLS IYAAK KW++VA L+  MR KGLRKEPG SWIK+KN+V+IFSADD+SN 
Sbjct: 576  HNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNP 635

Query: 391  YSDRIYEELEWLNSRMIDEGYVPDASSILHDVEQAEKIKMLGHHSERLAIAFGLIFIPPG 212
            +SD+IY ELE LN +M+ EGYVPD +S+LHDV+ +EKIKML HHSE+LAIAFGLIFIPPG
Sbjct: 636  FSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPG 695

Query: 211  LPIRVVRNLRVCGDCHNATKFISKI------VRDAVRFHLFKDRTCSCGD 80
            LPIRVV+NLRVCGDCHNATK+ISKI      VRDA RFHLFKD  CSCGD
Sbjct: 696  LPIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGD 745


>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
            predicted protein [Populus trichocarpa]
          Length = 743

 Score =  354 bits (908), Expect = 1e-95
 Identities = 169/230 (73%), Positives = 198/230 (86%), Gaps = 6/230 (2%)
 Frame = -3

Query: 751  TCMIDLLSRAGRLQEAKEFIE*MPFQPDAIGWATLLSSCRLHCNVEIGEWTADSLVKVEP 572
            TCMIDL  RAGRL+EAK FI  MPF PD+IGWATLLSSCRL+ N EIG+W A+SL++++P
Sbjct: 512  TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDP 571

Query: 571  HNPASYVLLSKIYAAKRKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIFSADDRSNQ 392
             NPA Y+LLS IYAAK KW +VA+L+  MR KG RKEPG+SWIK+K+KVYIFSADD+S+ 
Sbjct: 572  QNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSP 631

Query: 391  YSDRIYEELEWLNSRMIDEGYVPDASSILHDVEQAEKIKMLGHHSERLAIAFGLIFIPPG 212
            +SD+IY ELE LN +MI+EGYVPDASS+LHDVE +EK+KML HHSE+LAIAFGL+FIP G
Sbjct: 632  FSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPHG 691

Query: 211  LPIRVVRNLRVCGDCHNATKFISKI------VRDAVRFHLFKDRTCSCGD 80
            LPIRVV+NLRVCGDCHNATK+ISKI      VRDAVRFHLFKD TCSCGD
Sbjct: 692  LPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGD 741


>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Cucumis sativus]
            gi|449493520|ref|XP_004159329.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein
            At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  351 bits (901), Expect = 8e-95
 Identities = 170/230 (73%), Positives = 198/230 (86%), Gaps = 6/230 (2%)
 Frame = -3

Query: 751  TCMIDLLSRAGRLQEAKEFIE*MPFQPDAIGWATLLSSCRLHCNVEIGEWTADSLVKVEP 572
            TCMIDLLSRAGRL+EAK FI  MPF PDAIGWATLLSSCRL+ N+EIG+W A+SL K+EP
Sbjct: 512  TCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEP 571

Query: 571  HNPASYVLLSKIYAAKRKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIFSADDRSNQ 392
             NPASY+LLS IYAAK KWDDVA+L+  MR  G++KEPG+SWIK+KNKV+IFSADDRS+ 
Sbjct: 572  QNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSP 631

Query: 391  YSDRIYEELEWLNSRMIDEGYVPDASSILHDVEQAEKIKMLGHHSERLAIAFGLIFIPPG 212
            +SD+IY +LE L  +MI+EGYVPD S +LHDVE++EKIKML HHSE+LAIAFGL+FIP G
Sbjct: 632  FSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDG 691

Query: 211  LPIRVVRNLRVCGDCHNATKFISKI------VRDAVRFHLFKDRTCSCGD 80
            L IRVV+NLRVCGDCHNATK+IS+I      VRDAVRFHLFKD  CSCGD
Sbjct: 692  LQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGD 741


>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
            unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  349 bits (895), Expect = 4e-94
 Identities = 165/230 (71%), Positives = 196/230 (85%), Gaps = 6/230 (2%)
 Frame = -3

Query: 751  TCMIDLLSRAGRLQEAKEFIE*MPFQPDAIGWATLLSSCRLHCNVEIGEWTADSLVKVEP 572
            TC+IDLL RAGRL+EA+ FI  MP  PD +GWATLLSSCR+H ++EIG+W ADSL+ +EP
Sbjct: 512  TCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEP 571

Query: 571  HNPASYVLLSKIYAAKRKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIFSADDRSNQ 392
             NPASYVLLS +YA+K KWD VA+L+  MR K +RKEPGYSWIK+K KV++FSADD+S+ 
Sbjct: 572  QNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSP 631

Query: 391  YSDRIYEELEWLNSRMIDEGYVPDASSILHDVEQAEKIKMLGHHSERLAIAFGLIFIPPG 212
            +  +IY ELE LN +MI+EGYVPD SS+LHDVE++EKIKML HHSE+LAIAFGLIF+PPG
Sbjct: 632  FLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPG 691

Query: 211  LPIRVVRNLRVCGDCHNATKFISKI------VRDAVRFHLFKDRTCSCGD 80
            LPIRV++NLRVCGDCHNATKFISKI      VRDAVRFHLFKD TCSCGD
Sbjct: 692  LPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGD 741


>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355522732|gb|AET03186.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  348 bits (892), Expect = 9e-94
 Identities = 164/230 (71%), Positives = 195/230 (84%), Gaps = 6/230 (2%)
 Frame = -3

Query: 751  TCMIDLLSRAGRLQEAKEFIE*MPFQPDAIGWATLLSSCRLHCNVEIGEWTADSLVKVEP 572
            TCMIDL SRAGR++EA+ FI  MPF PDAI WATLLSSCR + N++IG+W A+ L++++P
Sbjct: 517  TCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDP 576

Query: 571  HNPASYVLLSKIYAAKRKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIFSADDRSNQ 392
            HN ASYVLLS +YAAK KW++VARL+ DMR KGLRKEPG SWIK+KN+V++FSADD+SN 
Sbjct: 577  HNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNP 636

Query: 391  YSDRIYEELEWLNSRMIDEGYVPDASSILHDVEQAEKIKMLGHHSERLAIAFGLIFIPPG 212
            +SD+IY ELE LN +MI EGYVPD +S+LHDV  +EKIKML HHSE+LAIAFGL+FIPPG
Sbjct: 637  FSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPG 696

Query: 211  LPIRVVRNLRVCGDCHNATKFISKI------VRDAVRFHLFKDRTCSCGD 80
            LPIRVV+NLRVC DCHNATK+ISKI      VRD  RFHLFKD TCSCGD
Sbjct: 697  LPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGD 746