BLASTX nr result

ID: Coptis21_contig00032968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032968
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632110.1| PREDICTED: uncharacterized protein LOC100853...    71   8e-11
ref|XP_002313511.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002530281.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
ref|XP_002880928.1| hypothetical protein ARALYDRAFT_901666 [Arab...    60   2e-07
ref|XP_002328298.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_003632110.1| PREDICTED: uncharacterized protein LOC100853079 [Vitis vinifera]
          Length = 130

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/75 (48%), Positives = 48/75 (64%)
 Frame = -2

Query: 286 ASAQGRSPHGLAYESPMVLSPSAFEFFHPTXXXXXSNADSPCVTSDCAPLPLXXXXXXXX 107
           A AQGR+PHGLAYE+PM  SPSAF+FFHP       +  +PC  S+C+PLP+        
Sbjct: 19  ARAQGRAPHGLAYENPMAFSPSAFDFFHPN--GQKPSTQNPCAASNCSPLPM------AA 70

Query: 106 XXXXSLAHESRLSTS 62
               SLAH+S+ S++
Sbjct: 71  QVEASLAHQSKASSN 85


>ref|XP_002313511.1| predicted protein [Populus trichocarpa] gi|222849919|gb|EEE87466.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/82 (48%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = -2

Query: 286 ASAQGRSPHGLAYESPMVLSPSAFEFFHPTXXXXXSNADSPC-VTSDCAPLPLXXXXXXX 110
           A AQGR+PHGL YE+P+  SPSA EFFHP       N  SPC  +S C+PLPL       
Sbjct: 23  AGAQGRAPHGLVYENPVAFSPSAVEFFHP--KTHEPNVKSPCAASSSCSPLPLAAQLEAT 80

Query: 109 XXXXXSLAHESRLSTSSTNGNR 44
                  A ES +STS   GNR
Sbjct: 81  DQ-----AQESEISTSQKGGNR 97


>ref|XP_002530281.1| conserved hypothetical protein [Ricinus communis]
           gi|223530179|gb|EEF32088.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = -2

Query: 280 AQGRSPHGLAYESPMVLSPSAFEFFHPTXXXXXSNADSPCV-TSDCAPLPLXXXXXXXXX 104
           AQ R+PHGLAYE+P+  SPSA EFFHP       N  +PC  +S C+PLPL         
Sbjct: 21  AQERAPHGLAYENPVAFSPSAVEFFHP--KTQDPNTKNPCAESSGCSPLPLAAQVEAAQ- 77

Query: 103 XXXSLAHESRLSTSSTNGN 47
                A ES L TS   G+
Sbjct: 78  -----ARESLLPTSQKGGS 91


>ref|XP_002880928.1| hypothetical protein ARALYDRAFT_901666 [Arabidopsis lyrata subsp.
           lyrata] gi|297326767|gb|EFH57187.1| hypothetical protein
           ARALYDRAFT_901666 [Arabidopsis lyrata subsp. lyrata]
          Length = 115

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/52 (53%), Positives = 35/52 (67%)
 Frame = -2

Query: 286 ASAQGRSPHGLAYESPMVLSPSAFEFFHPTXXXXXSNADSPCVTSDCAPLPL 131
           A AQ R+PHGLAYE+P+  SPSAF+FFH           +PCV S C+PLP+
Sbjct: 20  ALAQDRAPHGLAYETPVAFSPSAFDFFHAKPENPDPTL-NPCVESGCSPLPV 70


>ref|XP_002328298.1| predicted protein [Populus trichocarpa] gi|222837813|gb|EEE76178.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -2

Query: 286 ASAQGRSPHGLAYESPMVLSPSAFEFFHPTXXXXXSNADSPC-VTSDCAPLPLXXXXXXX 110
           A AQ R+PHGL YE P+  SPSA EFFHP       N ++PC  +S C+P PL       
Sbjct: 21  ARAQDRAPHGLVYEKPVAFSPSAVEFFHP--KTQEPNTENPCAASSSCSPFPLAAQLEDT 78

Query: 109 XXXXXSLAHESRLSTSSTNGNR 44
                    + ++STS   GN+
Sbjct: 79  DQT------QGKISTSQRGGNQ 94


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