BLASTX nr result

ID: Coptis21_contig00032939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032939
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533908.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
ref|XP_002320184.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002301400.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002509931.1| hypothetical protein RCOM_1691130 [Ricinus c...    65   7e-09
tpg|DAA61068.1| TPA: hypothetical protein ZEAMMB73_878502 [Zea m...    62   4e-08

>ref|XP_002533908.1| conserved hypothetical protein [Ricinus communis]
           gi|223526129|gb|EEF28473.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
 Frame = -2

Query: 297 EQKGDGQEEETMAVWDCGSPLYDSFELASLGHLIDRHLMILPNSVKGSKRWSCNRV-SDV 121
           ++  D  +++ +AVWD GSPLYDS+E+ SL HLI+RHLM LP+   GS++ S        
Sbjct: 9   QENEDNNDDKDLAVWDLGSPLYDSYEVVSLSHLIERHLMTLPS--LGSRKLSKKIFPPPF 66

Query: 120 TDSISPSTLRSRQAVFATKSKGNSKRGLLREFVGEDVWK 4
           +D++ P+TL +  A   T  + +  +  LREF+   +W+
Sbjct: 67  SDNVVPATLPASSAEKDTLDRPSLAK-TLREFIRVKLWR 104


>ref|XP_002320184.1| predicted protein [Populus trichocarpa] gi|222860957|gb|EEE98499.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 44/95 (46%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
 Frame = -2

Query: 306 QMKEQKGDG----QEEETMAVWDCGSPLYDSFELASLGHLIDRHLMILPNSVKGSKRWSC 139
           +M   K DG    QEE+T+A+WD GSPLYDS+E+ SL HLI+R LM LP S+ GSKR S 
Sbjct: 3   KMLGAKKDGLERKQEEKTLAIWDLGSPLYDSYEVVSLTHLIERQLMTLP-SLGGSKRLSS 61

Query: 138 NRVSDVTD--SISPSTLRSRQAVFATKSKGNSKRG 40
              S   D  ++ P+ L          SK  +KRG
Sbjct: 62  KIFSPACDDHAVIPAALLESN----MGSKRETKRG 92


>ref|XP_002301400.1| predicted protein [Populus trichocarpa] gi|222843126|gb|EEE80673.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
 Frame = -2

Query: 309 NQMKEQKGDGQ---EEETMAVWDCGSPLYDSFELASLGHLIDRHLMILPNSVKGSKRWSC 139
           N+  E K D Q   EE+ +A+WD GSPLYDS E+ SL H+I+RHLM +  S  GSK +S 
Sbjct: 2   NKTLEAKTDDQQQEEEKALAIWDLGSPLYDSHEVVSLAHVIERHLMTVLPSPGGSKGFSP 61

Query: 138 NRVSDVT----DSISPSTLRSRQAVFATKSKGNSKRGLLREFV 22
            ++S  +     +I  S + S+      +S  +SK   L EFV
Sbjct: 62  KKISQASVVDPAAILVSNMGSKSETKRVRS--SSKLNTLSEFV 102


>ref|XP_002509931.1| hypothetical protein RCOM_1691130 [Ricinus communis]
           gi|223549830|gb|EEF51318.1| hypothetical protein
           RCOM_1691130 [Ricinus communis]
          Length = 127

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = -2

Query: 297 EQKGDGQEEETMAVWDCGSPLYDSFELASLGHLIDRHLMILPNSVKGSKRW 145
           E++   + E    VWDCGSPLYDS+E+AS+GH+I+RH+M LP+S  GSKR+
Sbjct: 2   EEEKKKEAEAANIVWDCGSPLYDSYEIASVGHVIERHMMALPSSC-GSKRF 51


>tpg|DAA61068.1| TPA: hypothetical protein ZEAMMB73_878502 [Zea mays]
          Length = 133

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/56 (50%), Positives = 41/56 (73%)
 Frame = -2

Query: 339 EKSVGACDCQNQMKEQKGDGQEEETMAVWDCGSPLYDSFELASLGHLIDRHLMILP 172
           E++ G    Q Q + ++ D +EE  +A WDCGSPLYDSFE+ASL +++++H MILP
Sbjct: 7   EEAAGGAGLQLQTRGKEED-EEEPVLATWDCGSPLYDSFEVASLHYVLEKHTMILP 61


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