BLASTX nr result
ID: Coptis21_contig00032931
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00032931
(576 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 198 5e-49
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 198 5e-49
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,... 188 5e-46
ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|2... 182 3e-44
ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2... 177 1e-42
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 198 bits (504), Expect = 5e-49
Identities = 97/192 (50%), Positives = 134/192 (69%)
Frame = -1
Query: 576 PDQGLYEHILLVLAKENNEDVFENVSKDMKDVCGISLQSLTSIFIRKGCHEFAAKMLRLH 397
PD LYE +L VL KEN E+ V KDM+++CG++ Q + SI ++ C + AA MLRL
Sbjct: 537 PDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLA 596
Query: 396 VSHDFELERESLFAIMNSYSLIGKRMEALALLDDLREKVPKSHDLIAEASIVLLCKDHEV 217
+S EL+RE+L +I+ SY G+ +EA LLD LRE SH LI EA I++LCK H++
Sbjct: 597 ISQGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQL 656
Query: 216 GAAMEQYNNSKIFGLSKGSCSMYEALIKCCEVTEHFAEASQVYTDMKFCGMEPSESLYRC 37
G A+ +Y ++ FGL GS +MYE+L+ CCE E FAEASQ+++DM+F G+EPS+ LYR
Sbjct: 657 GDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRS 716
Query: 36 LVFIYCKIGFPE 1
+V YCK+GFPE
Sbjct: 717 MVVTYCKMGFPE 728
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 198 bits (504), Expect = 5e-49
Identities = 97/192 (50%), Positives = 134/192 (69%)
Frame = -1
Query: 576 PDQGLYEHILLVLAKENNEDVFENVSKDMKDVCGISLQSLTSIFIRKGCHEFAAKMLRLH 397
PD LYE +L VL KEN E+ V KDM+++CG++ Q + SI ++ C + AA MLRL
Sbjct: 569 PDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLA 628
Query: 396 VSHDFELERESLFAIMNSYSLIGKRMEALALLDDLREKVPKSHDLIAEASIVLLCKDHEV 217
+S EL+RE+L +I+ SY G+ +EA LLD LRE SH LI EA I++LCK H++
Sbjct: 629 ISQGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQL 688
Query: 216 GAAMEQYNNSKIFGLSKGSCSMYEALIKCCEVTEHFAEASQVYTDMKFCGMEPSESLYRC 37
G A+ +Y ++ FGL GS +MYE+L+ CCE E FAEASQ+++DM+F G+EPS+ LYR
Sbjct: 689 GDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRS 748
Query: 36 LVFIYCKIGFPE 1
+V YCK+GFPE
Sbjct: 749 MVVTYCKMGFPE 760
>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1429
Score = 188 bits (478), Expect = 5e-46
Identities = 91/192 (47%), Positives = 140/192 (72%)
Frame = -1
Query: 576 PDQGLYEHILLVLAKENNEDVFENVSKDMKDVCGISLQSLTSIFIRKGCHEFAAKMLRLH 397
PD +Y +L L +EN + + + +DM++VCG++ Q++ SI ++ C+E AA MLRL
Sbjct: 525 PDPTVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQAIASILVKGECYEDAAGMLRLA 584
Query: 396 VSHDFELERESLFAIMNSYSLIGKRMEALALLDDLREKVPKSHDLIAEASIVLLCKDHEV 217
+S E++ E+L +I++SYS G++ EAL LL L+ V KS+ L+AEASIV LCK ++
Sbjct: 585 ISGSDEIDSENLLSILSSYSSSGRQAEALDLLQFLKGHVSKSNQLVAEASIVTLCKAKQL 644
Query: 216 GAAMEQYNNSKIFGLSKGSCSMYEALIKCCEVTEHFAEASQVYTDMKFCGMEPSESLYRC 37
AA+++YN+++ F GSC+MYE+LI+CCE E AEASQ+++DM+F G++PS+SLYR
Sbjct: 645 DAALKEYNDTREFDWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRS 704
Query: 36 LVFIYCKIGFPE 1
+V +YCK+GFPE
Sbjct: 705 MVLMYCKMGFPE 716
>ref|XP_002309826.1| predicted protein [Populus trichocarpa] gi|222852729|gb|EEE90276.1|
predicted protein [Populus trichocarpa]
Length = 1480
Score = 182 bits (463), Expect = 3e-44
Identities = 87/191 (45%), Positives = 137/191 (71%)
Frame = -1
Query: 573 DQGLYEHILLVLAKENNEDVFENVSKDMKDVCGISLQSLTSIFIRKGCHEFAAKMLRLHV 394
D LYE +L L K N + V +DM+++CG++ Q+++SI ++ C++ AAKMLR +
Sbjct: 570 DHSLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQTISSILVKGECYDEAAKMLRRAI 629
Query: 393 SHDFELERESLFAIMNSYSLIGKRMEALALLDDLREKVPKSHDLIAEASIVLLCKDHEVG 214
S FE++RE+L +I++SYS G+ EAL LL+ L+E P+S +I EA +V+LCK ++
Sbjct: 630 SDHFEIDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLD 689
Query: 213 AAMEQYNNSKIFGLSKGSCSMYEALIKCCEVTEHFAEASQVYTDMKFCGMEPSESLYRCL 34
AA+++Y+N++ G + GS +M+E+LI+CC E EASQV++DM+FCG++ SESLY +
Sbjct: 690 AALKEYSNNRELGFT-GSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYESM 748
Query: 33 VFIYCKIGFPE 1
V +YCK+GFPE
Sbjct: 749 VLLYCKMGFPE 759
>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
predicted protein [Populus trichocarpa]
Length = 1450
Score = 177 bits (448), Expect = 1e-42
Identities = 84/192 (43%), Positives = 135/192 (70%)
Frame = -1
Query: 576 PDQGLYEHILLVLAKENNEDVFENVSKDMKDVCGISLQSLTSIFIRKGCHEFAAKMLRLH 397
P+ LYE +L L N + V +DM++VCG++ Q+++ I ++ C++ AAKMLR
Sbjct: 571 PEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYILVKGDCYDEAAKMLRRA 630
Query: 396 VSHDFELERESLFAIMNSYSLIGKRMEALALLDDLREKVPKSHDLIAEASIVLLCKDHEV 217
+S +E++RE+L +I++SYS G+ AL LL+ L+E P+S +I EA +V+LCK ++
Sbjct: 631 ISDRYEIDRENLLSILSSYSSSGRHSVALDLLELLKEHTPRSSQMITEALVVMLCKAQQL 690
Query: 216 GAAMEQYNNSKIFGLSKGSCSMYEALIKCCEVTEHFAEASQVYTDMKFCGMEPSESLYRC 37
A+++Y+NS+ G + GS +M+EALI+CC E F EASQV++DM+FCG++ SE LY+
Sbjct: 691 DTALKEYSNSRELGFT-GSFTMFEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQS 749
Query: 36 LVFIYCKIGFPE 1
++ +YCK+GFPE
Sbjct: 750 MMLLYCKMGFPE 761