BLASTX nr result

ID: Coptis21_contig00032930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032930
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19198.3| unnamed protein product [Vitis vinifera]              144   6e-33
ref|XP_002306565.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_004136276.1| PREDICTED: thylakoid lumenal 29 kDa protein,...   138   4e-31
ref|XP_002513968.1| peroxidase, putative [Ricinus communis] gi|2...   137   7e-31
ref|XP_002872363.1| hypothetical protein ARALYDRAFT_489709 [Arab...   137   9e-31

>emb|CBI19198.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/80 (85%), Positives = 76/80 (95%)
 Frame = -2

Query: 355 GPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVMKYQRSRETVSETDYQVDLINTLTKLS 176
           GPRQLAVMSAFLGPDQ+A E+LLA+DP+V PWV KYQRSRETVS+TDY+VDLI TLTKLS
Sbjct: 260 GPRQLAVMSAFLGPDQLASEALLATDPDVAPWVQKYQRSRETVSQTDYEVDLITTLTKLS 319

Query: 175 CLGQQINYEAYTYPVKKVDF 116
           CLGQQINYEAY+YPV+KVDF
Sbjct: 320 CLGQQINYEAYSYPVQKVDF 339


>ref|XP_002306565.1| predicted protein [Populus trichocarpa] gi|222856014|gb|EEE93561.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/79 (82%), Positives = 74/79 (93%)
 Frame = -2

Query: 355 GPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVMKYQRSRETVSETDYQVDLINTLTKLS 176
           GPRQLAVMSAFLGPDQ A E+LLA+DP+VTPWV KYQRSRETVS+TDY+VDLI TLTKLS
Sbjct: 248 GPRQLAVMSAFLGPDQAATEALLATDPDVTPWVQKYQRSRETVSQTDYEVDLITTLTKLS 307

Query: 175 CLGQQINYEAYTYPVKKVD 119
            +GQQINYEAYTYPV+K++
Sbjct: 308 SMGQQINYEAYTYPVRKIE 326


>ref|XP_004136276.1| PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic-like
           [Cucumis sativus] gi|449496987|ref|XP_004160282.1|
           PREDICTED: thylakoid lumenal 29 kDa protein,
           chloroplastic-like [Cucumis sativus]
          Length = 368

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/79 (83%), Positives = 72/79 (91%)
 Frame = -2

Query: 355 GPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVMKYQRSRETVSETDYQVDLINTLTKLS 176
           GPRQLAV+SAFLGPDQ A E LLASDP+V PWV KYQRSRETVS+TDY+VDLI TLTK+S
Sbjct: 284 GPRQLAVLSAFLGPDQAATEELLASDPDVFPWVQKYQRSRETVSQTDYEVDLITTLTKIS 343

Query: 175 CLGQQINYEAYTYPVKKVD 119
            LGQQINYEAY+YPVKKVD
Sbjct: 344 SLGQQINYEAYSYPVKKVD 362


>ref|XP_002513968.1| peroxidase, putative [Ricinus communis] gi|223547054|gb|EEF48551.1|
           peroxidase, putative [Ricinus communis]
          Length = 232

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/79 (82%), Positives = 72/79 (91%)
 Frame = -2

Query: 355 GPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVMKYQRSRETVSETDYQVDLINTLTKLS 176
           GPRQLAVMSAF+GPDQ A E+LLA+DP+V PWV KYQRSRETVS+TDY+VDLI TLTKLS
Sbjct: 148 GPRQLAVMSAFIGPDQAATEALLATDPDVLPWVQKYQRSRETVSQTDYEVDLITTLTKLS 207

Query: 175 CLGQQINYEAYTYPVKKVD 119
            LGQQINYEAYTYPV K+D
Sbjct: 208 SLGQQINYEAYTYPVLKID 226


>ref|XP_002872363.1| hypothetical protein ARALYDRAFT_489709 [Arabidopsis lyrata subsp.
           lyrata] gi|297318200|gb|EFH48622.1| hypothetical protein
           ARALYDRAFT_489709 [Arabidopsis lyrata subsp. lyrata]
          Length = 337

 Score =  137 bits (345), Expect = 9e-31
 Identities = 63/80 (78%), Positives = 73/80 (91%)
 Frame = -2

Query: 358 LGPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVMKYQRSRETVSETDYQVDLINTLTKL 179
           LGPRQLAVMSAFLGPDQ+A E LLA+DP+V PWV KYQRSRETVS+TDY+VDLI   TKL
Sbjct: 252 LGPRQLAVMSAFLGPDQLATEQLLATDPQVAPWVQKYQRSRETVSQTDYEVDLITAFTKL 311

Query: 178 SCLGQQINYEAYTYPVKKVD 119
           SCLGQQIN+EAYTYPV++++
Sbjct: 312 SCLGQQINFEAYTYPVERIN 331


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