BLASTX nr result

ID: Coptis21_contig00032913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032913
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297770.1| predicted protein [Populus trichocarpa] gi|2...   187   8e-46
ref|XP_002304776.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_003595736.1| F-box/WD repeat-containing protein 1A [Medic...   178   4e-43
ref|XP_002268927.1| PREDICTED: myosin heavy chain kinase B [Viti...   178   4e-43
emb|CAN67368.1| hypothetical protein VITISV_021843 [Vitis vinifera]   178   4e-43

>ref|XP_002297770.1| predicted protein [Populus trichocarpa] gi|222845028|gb|EEE82575.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  187 bits (475), Expect = 8e-46
 Identities = 91/109 (83%), Positives = 98/109 (89%)
 Frame = +1

Query: 7   RLWIEHADSISCLAVYNGLIYSGSWDKTLKVWRVSDLKCLESIKAHDDAINGLVAHKGIV 186
           +LWIEHADSISCLAVYNGL+YSGSWDKTLKVWR+SDLKCLESIKAHDDAINGLVA KGIV
Sbjct: 162 KLWIEHADSISCLAVYNGLVYSGSWDKTLKVWRISDLKCLESIKAHDDAINGLVACKGIV 221

Query: 187 YSASADGKIKMWNKEVKGSHCLKGVLVGHKDVSLNSVIICEDERLTVYG 333
           YSASADGKIK W KE K SH LKG+L GHKDVSLNSVI+ +D +  VYG
Sbjct: 222 YSASADGKIKAWGKEGKSSHSLKGILEGHKDVSLNSVIVSDDGK-WVYG 269


>ref|XP_002304776.1| predicted protein [Populus trichocarpa] gi|222842208|gb|EEE79755.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/109 (83%), Positives = 97/109 (88%)
 Frame = +1

Query: 7   RLWIEHADSISCLAVYNGLIYSGSWDKTLKVWRVSDLKCLESIKAHDDAINGLVAHKGIV 186
           +LWIEHADSISCL VYNGLIYSGSWDKTLKVWR+SDLKCLESIKAHDDAINGLVA KGIV
Sbjct: 159 KLWIEHADSISCLTVYNGLIYSGSWDKTLKVWRISDLKCLESIKAHDDAINGLVACKGIV 218

Query: 187 YSASADGKIKMWNKEVKGSHCLKGVLVGHKDVSLNSVIICEDERLTVYG 333
           YSASADGKIK W KE K SH LKG+L GHKDVSLNSVI+ +D +  VYG
Sbjct: 219 YSASADGKIKAWGKEGKSSHSLKGILEGHKDVSLNSVIVSDDGK-WVYG 266


>ref|XP_003595736.1| F-box/WD repeat-containing protein 1A [Medicago truncatula]
           gi|355484784|gb|AES65987.1| F-box/WD repeat-containing
           protein 1A [Medicago truncatula]
          Length = 413

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/109 (80%), Positives = 94/109 (86%)
 Frame = +1

Query: 7   RLWIEHADSISCLAVYNGLIYSGSWDKTLKVWRVSDLKCLESIKAHDDAINGLVAHKGIV 186
           RLWIEHADSISCL V+NGLIYSGSWDKTLKVW VSDLKCLESIKAHDDAINGLVA KGIV
Sbjct: 170 RLWIEHADSISCLVVHNGLIYSGSWDKTLKVWSVSDLKCLESIKAHDDAINGLVACKGIV 229

Query: 187 YSASADGKIKMWNKEVKGSHCLKGVLVGHKDVSLNSVIICEDERLTVYG 333
           YSASADGKIK W KE K  H LKGVL GH+DVS NSV++ +D +  VYG
Sbjct: 230 YSASADGKIKAWGKEGKNLHTLKGVLEGHRDVSFNSVVVSDDGK-WVYG 277


>ref|XP_002268927.1| PREDICTED: myosin heavy chain kinase B [Vitis vinifera]
           gi|296081304|emb|CBI17748.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/109 (78%), Positives = 96/109 (88%)
 Frame = +1

Query: 7   RLWIEHADSISCLAVYNGLIYSGSWDKTLKVWRVSDLKCLESIKAHDDAINGLVAHKGIV 186
           RLWIEHADSISCL + NGLIYSGSWDKTLKVWR++DLKCLESIKAHDDAINGLV+ KG+V
Sbjct: 168 RLWIEHADSISCLTICNGLIYSGSWDKTLKVWRIADLKCLESIKAHDDAINGLVSCKGLV 227

Query: 187 YSASADGKIKMWNKEVKGSHCLKGVLVGHKDVSLNSVIICEDERLTVYG 333
           YSASADGKIK W KE   SH LKG+L G+KDVSLNSV++ ED R+ VYG
Sbjct: 228 YSASADGKIKAWGKEGDNSHSLKGILEGNKDVSLNSVVVSEDGRV-VYG 275


>emb|CAN67368.1| hypothetical protein VITISV_021843 [Vitis vinifera]
          Length = 399

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/109 (78%), Positives = 96/109 (88%)
 Frame = +1

Query: 7   RLWIEHADSISCLAVYNGLIYSGSWDKTLKVWRVSDLKCLESIKAHDDAINGLVAHKGIV 186
           RLWIEHADSISCL + NGLIYSGSWDKTLKVWR++DLKCLESIKAHDDAINGLV+ KG+V
Sbjct: 170 RLWIEHADSISCLTICNGLIYSGSWDKTLKVWRIADLKCLESIKAHDDAINGLVSCKGLV 229

Query: 187 YSASADGKIKMWNKEVKGSHCLKGVLVGHKDVSLNSVIICEDERLTVYG 333
           YSASADGKIK W KE   SH LKG+L G+KDVSLNSV++ ED R+ VYG
Sbjct: 230 YSASADGKIKAWGKEGDNSHSLKGILEGNKDVSLNSVVVSEDGRV-VYG 277


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