BLASTX nr result

ID: Coptis21_contig00032904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032904
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002338311.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002306583.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
emb|CBI19138.3| unnamed protein product [Vitis vinifera]              166   1e-39
ref|XP_002285805.1| PREDICTED: probable beta-D-xylosidase 7-like...   166   1e-39
ref|XP_004163321.1| PREDICTED: LOW QUALITY PROTEIN: probable bet...   162   3e-38

>ref|XP_002338311.1| predicted protein [Populus trichocarpa] gi|222871839|gb|EEF08970.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/103 (73%), Positives = 90/103 (87%)
 Frame = +1

Query: 178 FCSLLISCTTTQPPFACDTSNPSTKTFPFCKTSLPIAQRVHDLISRLTLEEKIPQLVNTA 357
           F  +++   +TQPPF+CD+SNPSTKTFPFCKT+LPI+QR +DL+SRLTLEEKI QLVN+A
Sbjct: 14  FTVIVLQVDSTQPPFSCDSSNPSTKTFPFCKTTLPISQRANDLVSRLTLEEKISQLVNSA 73

Query: 358 PSIPRLGIPSYQWWSESLHGVSNSGPGIRFNGTIHSATSFPQV 486
             IPRLGIP YQWWSE+LHGV+ +GPGIRFNGTI  ATSFPQV
Sbjct: 74  QPIPRLGIPGYQWWSEALHGVAYAGPGIRFNGTIKRATSFPQV 116


>ref|XP_002306583.1| predicted protein [Populus trichocarpa] gi|222856032|gb|EEE93579.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/103 (73%), Positives = 90/103 (87%)
 Frame = +1

Query: 178 FCSLLISCTTTQPPFACDTSNPSTKTFPFCKTSLPIAQRVHDLISRLTLEEKIPQLVNTA 357
           F  +++   +TQPPF+CD+SNPSTKTFPFCKT+LPI+QR +DL+SRLTLEEKI QLVN+A
Sbjct: 14  FTVIVLQVDSTQPPFSCDSSNPSTKTFPFCKTTLPISQRANDLVSRLTLEEKISQLVNSA 73

Query: 358 PSIPRLGIPSYQWWSESLHGVSNSGPGIRFNGTIHSATSFPQV 486
             IPRLGIP YQWWSE+LHGV+ +GPGIRFNGTI  ATSFPQV
Sbjct: 74  QPIPRLGIPGYQWWSEALHGVAYAGPGIRFNGTIKRATSFPQV 116


>emb|CBI19138.3| unnamed protein product [Vitis vinifera]
          Length = 1411

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/117 (65%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
 Frame = +1

Query: 139 MKFHTVSLLITLSFCSLLISCTTTQ-PPFACDTSNPSTKTFPFCKTSLPIAQRVHDLISR 315
           MK H++ L+  +    +L+   +TQ PPF+CD+SNPSTK++ FCKT+LPI  RV DL+SR
Sbjct: 1   MKLHSLLLINLIYVTVILVGVESTQSPPFSCDSSNPSTKSYHFCKTTLPIPDRVRDLVSR 60

Query: 316 LTLEEKIPQLVNTAPSIPRLGIPSYQWWSESLHGVSNSGPGIRFNGTIHSATSFPQV 486
           LTL+EKI QLVN+AP+IPRLGIP+Y+WWSE+LHGV+++GPGIRFNGTI SATSFPQV
Sbjct: 61  LTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVADAGPGIRFNGTIRSATSFPQV 117



 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/94 (67%), Positives = 80/94 (85%)
 Frame = +1

Query: 205 TTQPPFACDTSNPSTKTFPFCKTSLPIAQRVHDLISRLTLEEKIPQLVNTAPSIPRLGIP 384
           ++ PPFACD+S+P TK++ FC T+L I+QR  DLISRLTL+EKI QL+++A SIPRLGIP
Sbjct: 693 SSSPPFACDSSDPLTKSYAFCNTTLRISQRASDLISRLTLDEKISQLISSAASIPRLGIP 752

Query: 385 SYQWWSESLHGVSNSGPGIRFNGTIHSATSFPQV 486
           +Y+WWSE+LHG+ +   GIRFNGTI SATSFPQV
Sbjct: 753 AYEWWSEALHGIRDR-HGIRFNGTIRSATSFPQV 785


>ref|XP_002285805.1| PREDICTED: probable beta-D-xylosidase 7-like [Vitis vinifera]
          Length = 774

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/117 (65%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
 Frame = +1

Query: 139 MKFHTVSLLITLSFCSLLISCTTTQ-PPFACDTSNPSTKTFPFCKTSLPIAQRVHDLISR 315
           MK H++ L+  +    +L+   +TQ PPF+CD+SNPSTK++ FCKT+LPI  RV DL+SR
Sbjct: 1   MKLHSLLLINLIYVTVILVGVESTQSPPFSCDSSNPSTKSYHFCKTTLPIPDRVRDLVSR 60

Query: 316 LTLEEKIPQLVNTAPSIPRLGIPSYQWWSESLHGVSNSGPGIRFNGTIHSATSFPQV 486
           LTL+EKI QLVN+AP+IPRLGIP+Y+WWSE+LHGV+++GPGIRFNGTI SATSFPQV
Sbjct: 61  LTLDEKISQLVNSAPAIPRLGIPAYEWWSEALHGVADAGPGIRFNGTIRSATSFPQV 117


>ref|XP_004163321.1| PREDICTED: LOW QUALITY PROTEIN: probable beta-D-xylosidase 7-like
           [Cucumis sativus]
          Length = 783

 Score =  162 bits (410), Expect = 3e-38
 Identities = 74/115 (64%), Positives = 95/115 (82%)
 Frame = +1

Query: 142 KFHTVSLLITLSFCSLLISCTTTQPPFACDTSNPSTKTFPFCKTSLPIAQRVHDLISRLT 321
           K   ++LL++ +F SL+++ +++QPP+ACD+SNP TKT PFCKT LPI  R  DL+SRLT
Sbjct: 12  KIKLLTLLLSAAFLSLIVAGSSSQPPYACDSSNPLTKTLPFCKTYLPIKLRARDLVSRLT 71

Query: 322 LEEKIPQLVNTAPSIPRLGIPSYQWWSESLHGVSNSGPGIRFNGTIHSATSFPQV 486
           L+EK+ QLVNT P IPRLGIP+Y+WWSE+LHGV+N G GIR NGTI +ATSFPQV
Sbjct: 72  LDEKVLQLVNTVPPIPRLGIPAYEWWSEALHGVANVGYGIRLNGTITAATSFPQV 126


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