BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032891
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_002525572.1| pentatricopeptide repeat-containing protein,...   173   1e-41
ref|XP_002886049.1| pentatricopeptide repeat-containing protein ...   161   6e-38
gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|...   153   2e-35
ref|NP_179518.1| pentatricopeptide repeat-containing protein [Ar...   153   2e-35

>ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  182 bits (462), Expect = 2e-44
 Identities = 88/153 (57%), Positives = 118/153 (77%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A K+F +M E+G+ PD  SYTT++ GYC V  ++ AL  LG+MLK G + +V TYT+LID
Sbjct: 342 AAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLID 401

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
           S CK G+++ A+YLF+ +  EGL PDVV+YN+LM+GY KKG+L KAFEL+  MR A VSP
Sbjct: 402 SCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSP 461

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRGF 2
           ++ +YNI++HGL+KRG V EA+ ILDEL RRGF
Sbjct: 462 DLVTYNILIHGLIKRGLVNEAKDILDELTRRGF 494



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/152 (32%), Positives = 77/152 (50%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A  LF  M   G+ PD  SY T++ GY   G+L KA  LL  M   G    +VTY +LI 
Sbjct: 412 AEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIH 471

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
              K G +  A  +   + R G  PDVVT+ +++ G+S KG   +AF L   M    + P
Sbjct: 472 GLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEP 531

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRG 5
           +V + + +++G  +   + EA  +  +++  G
Sbjct: 532 DVVTCSALLNGYCRTRCMAEANVLFHKMLDAG 563



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/152 (29%), Positives = 78/152 (51%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A +L   M   G+ PD  +Y  +I G    G +N+A  +L ++ + GF   VVT+T +I 
Sbjct: 447 AFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIG 506

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
            +   G+ + A  LF  +    L PDVVT ++L++GY +   + +A  L   M  A +  
Sbjct: 507 GFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKA 566

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRG 5
           +V  YN ++HG    G + +A  ++  ++  G
Sbjct: 567 DVILYNSLIHGFCSLGNIDDACHLVSMMIEHG 598



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 45/146 (30%), Positives = 78/146 (53%)
 Frame = -3

Query: 442 EMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLIDSYCKIG 263
           EM   G+  ++   +  I GYC  G ++    LL +M   G K  VV YT++IDS CK+ 
Sbjct: 211 EMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMS 270

Query: 262 DLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSPNVASYN 83
            LK A  +   + + G+  D V+ +S++DGY K G   K+ E +D + + ++SPN+  +N
Sbjct: 271 LLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVG---KSEEAMDVLEVFNLSPNIFVFN 327

Query: 82  IIVHGLVKRGFVMEARAILDELVRRG 5
             +  L   G +++A  +  ++   G
Sbjct: 328 SFISKLCTDGNMLKAAKVFQDMCEMG 353



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/135 (30%), Positives = 70/135 (51%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A  +  E++  G  PD  ++T II G+   G   +A +L   M ++  +  VVT + L++
Sbjct: 482 AKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLN 541

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
            YC+   +  A+ LF  +   GL+ DV+ YNSL+ G+   G +  A  LV  M    + P
Sbjct: 542 GYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMP 601

Query: 100 NVASYNIIVHGLVKR 56
           N  +++ +V G  K+
Sbjct: 602 NNITHHALVLGYEKK 616


>ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535151|gb|EEF36831.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 687

 Score =  173 bits (438), Expect = 1e-41
 Identities = 84/152 (55%), Positives = 109/152 (71%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A K F EMSE G++PD   YT II GYC VG +NKA   LG+MLK G   +V TYT+LI+
Sbjct: 375 ASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLIN 434

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
           + CK GD+  A+YL + +  EGL PDVVT+N L+DG+ KKGYL KAFEL+D MR A +SP
Sbjct: 435 ACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSP 494

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRG 5
           +  +YN ++H L+ RG+  EA+ IL EL+RRG
Sbjct: 495 DTVTYNALIHSLIARGYPNEAKDILHELIRRG 526



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A  +   M   G+H ++   +  I+ YC  G +     +L +M   G K  V+ YT++ID
Sbjct: 238 AWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVID 297

Query: 280 SYCKIGDLKSA-DYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVS 104
           + CKI  +K A   LF+MI   G+  D V+ +S++DGY KKG   KA  L   +   +V 
Sbjct: 298 ALCKISCVKVATSLLFKMIHC-GISVDSVSVSSVIDGYCKKGRSDKAINL---LNFFNVR 353

Query: 103 PNVASYNIIVHGLVKRGFVMEARAILDELVRRG 5
           PN+  Y+  +  L K G ++EA     E+   G
Sbjct: 354 PNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFG 386



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/153 (28%), Positives = 82/153 (53%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A +L   M   G+ PD+ +Y  +I      GY N+A  +L ++++ G    V+T+T +ID
Sbjct: 480 AFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVID 539

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
            + K G+ + A  ++  +    ++PDVVT ++L++GY +   + +A  L   M  A + P
Sbjct: 540 GFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKP 599

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRGF 2
           ++  YN ++HG    G +  A  ++  ++  GF
Sbjct: 600 DLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGF 632



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 49/152 (32%), Positives = 75/152 (49%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A  L   M   G+ PD  ++  +I G+   GYL KA  LL  M   G     VTY  LI 
Sbjct: 445 AEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIH 504

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
           S    G    A  +   + R GL PDV+T+  ++DG+SKKG   +AF +   M    V P
Sbjct: 505 SLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKP 564

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRG 5
           +V + + +++G  +   + EA A+  +++  G
Sbjct: 565 DVVTCSALLNGYCRARRMDEANALFLKMLDAG 596



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 40/135 (29%), Positives = 69/135 (51%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A  + HE+   G+ PD  ++T +I G+   G   +A ++   M +   K  VVT + L++
Sbjct: 515 AKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLN 574

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
            YC+   +  A+ LF  +   GL+PD+V YN+L+ G+   G ++ A  LV  M      P
Sbjct: 575 GYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLP 634

Query: 100 NVASYNIIVHGLVKR 56
           N+ ++     G  K+
Sbjct: 635 NITTHRAFALGFEKK 649


>ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331889|gb|EFH62308.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 755

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/153 (50%), Positives = 108/153 (70%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A  +F E+ ELG+ PD   YTT+I GYC +G  +KA    G +LK+G   +++TYT+LI 
Sbjct: 459 ASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIG 518

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
           +  K G +  A+ +FR+++ EGL PDVVTYN+LM GY K   L+K FEL+D MR A +SP
Sbjct: 519 ACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISP 578

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRGF 2
           +VA+YNI++H +V RG+V EA  I+ EL+RRGF
Sbjct: 579 DVATYNILIHSMVVRGYVDEANEIISELIRRGF 611



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/150 (30%), Positives = 82/150 (54%)
 Frame = -3

Query: 454  KLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLIDSY 275
            +L  EM   GI PD  +Y  +I      GY+++A  ++ ++++ GF  + + +T +I   
Sbjct: 566  ELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGL 625

Query: 274  CKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSPNV 95
             K GD + A  L+  +    ++PDVVT ++L+ GY +   + KA  L D +  A + P+V
Sbjct: 626  SKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDV 685

Query: 94   ASYNIIVHGLVKRGFVMEARAILDELVRRG 5
              YN ++HG    G + +A  ++  +V+RG
Sbjct: 686  VLYNTLIHGYCSVGDIEKACELIGLMVQRG 715



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
 Frame = -3

Query: 460  AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
            A+++  E+   G  P + ++T +I G    G   +A +L   M     K  VVT + L+ 
Sbjct: 599  ANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLH 658

Query: 280  SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
             YC+   ++ A  LF  +   GL+PDVV YN+L+ GY   G + KA EL+  M    + P
Sbjct: 659  GYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 718

Query: 100  NVASYNIIVHGLVKRGFV---MEARAILDELV 14
            N ++++ +V GL  + F+     A  +L+E+V
Sbjct: 719  NESTHHALVVGLEGKRFMNSEEHASMLLEEIV 750



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 44/152 (28%), Positives = 74/152 (48%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A +    M   G H ++   +  I+ YC  GY +K   LL  M   G +  +V +TV ID
Sbjct: 322 AREFVEHMLSRGRHLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFID 381

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
             CK G L+ A  +   ++  G+  D V+ +S++DG+ K G   +A +L+ + RL    P
Sbjct: 382 KLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RP 438

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRG 5
           N+  Y+  +  +   G ++ A  I  E+   G
Sbjct: 439 NIFVYSSFLSNICSTGDMLRASTIFQEIFELG 470



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/152 (28%), Positives = 73/152 (48%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A  +F  M   G+HPD  +Y  ++ GY     LNK   L+ +M   G    V TY +LI 
Sbjct: 529 AESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 588

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
           S    G +  A+ +   + R G  P  + +  ++ G SK+G   +AF L   M    V P
Sbjct: 589 SMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKP 648

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRG 5
           +V + + ++HG  +   + +A  + D+L+  G
Sbjct: 649 DVVTCSALLHGYCRAQRMEKAIVLFDKLLDAG 680


>gb|AAS99720.1| At2g19280 [Arabidopsis thaliana] gi|62319953|dbj|BAD94048.1|
           putative salt-inducible protein [Arabidopsis thaliana]
           gi|110738808|dbj|BAF01327.1| putative salt-inducible
           protein [Arabidopsis thaliana]
          Length = 693

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/153 (47%), Positives = 105/153 (68%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A  +F E+ ELG+ PD   YTT+I GYC +G  +KA    G +LK+G   ++ T T+LI 
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
           +  + G +  A+ +FR ++ EGL+ DVVTYN+LM GY K   L+K FEL+D MR A +SP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRGF 2
           +VA+YNI++H +V RG++ EA  I+ EL+RRGF
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGF 544



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/150 (30%), Positives = 83/150 (55%)
 Frame = -3

Query: 454 KLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLIDSY 275
           +L  EM   GI PD  +Y  +I      GY+++A  ++ ++++ GF  + + +T +I  +
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558

Query: 274 CKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSPNV 95
            K GD + A  L+  +    ++PDVVT ++L+ GY K   + KA  L + +  A + P+V
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618

Query: 94  ASYNIIVHGLVKRGFVMEARAILDELVRRG 5
             YN ++HG    G + +A  ++  +V+RG
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRG 648



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A+++  E+   G  P + ++T +I G+   G   +A +L   M     K  VVT + L+ 
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
            YCK   ++ A  LF  +   GL+PDVV YN+L+ GY   G + KA EL+  M    + P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651

Query: 100 NVASYNIIVHGLVKRGFV---MEARAILDELV 14
           N ++++ +V GL  + FV     A  +L+E++
Sbjct: 652 NESTHHALVLGLEGKRFVNSETHASMLLEEII 683



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/152 (29%), Positives = 74/152 (48%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A +    M   G H ++   +  I+ YC  GY +K   LL  M   G +  +V +TV ID
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
             CK G LK A  +   ++  G+  D V+ +S++DG+ K G   +A +L+ + RL    P
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RP 371

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRG 5
           N+  Y+  +  +   G ++ A  I  E+   G
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELG 403



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/141 (26%), Positives = 64/141 (45%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A KL +++ + GI P      +++K    V  L  A   +  ML  G  L     ++ I 
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
            YC  G       L   ++  G+RPD+V +   +D   K G+L +A  ++  ++L  +S 
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339

Query: 100 NVASYNIIVHGLVKRGFVMEA 38
           +  S + ++ G  K G   EA
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEA 360


>ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334184304|ref|NP_001189552.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g19280 gi|3135258|gb|AAC16458.1| putative
           salt-inducible protein [Arabidopsis thaliana]
           gi|330251769|gb|AEC06863.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|330251770|gb|AEC06864.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/153 (47%), Positives = 105/153 (68%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A  +F E+ ELG+ PD   YTT+I GYC +G  +KA    G +LK+G   ++ T T+LI 
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
           +  + G +  A+ +FR ++ EGL+ DVVTYN+LM GY K   L+K FEL+D MR A +SP
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRGF 2
           +VA+YNI++H +V RG++ EA  I+ EL+RRGF
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGF 544



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/150 (30%), Positives = 83/150 (55%)
 Frame = -3

Query: 454 KLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLIDSY 275
           +L  EM   GI PD  +Y  +I      GY+++A  ++ ++++ GF  + + +T +I  +
Sbjct: 499 ELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGF 558

Query: 274 CKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSPNV 95
            K GD + A  L+  +    ++PDVVT ++L+ GY K   + KA  L + +  A + P+V
Sbjct: 559 SKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDV 618

Query: 94  ASYNIIVHGLVKRGFVMEARAILDELVRRG 5
             YN ++HG    G + +A  ++  +V+RG
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIGLMVQRG 648



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 3/152 (1%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A+++  E+   G  P + ++T +I G+   G   +A +L   M     K  VVT + L+ 
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
            YCK   ++ A  LF  +   GL+PDVV YN+L+ GY   G + KA EL+  M    + P
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651

Query: 100 NVASYNIIVHGLVKRGFV---MEARAILDELV 14
           N ++++ +V GL  + FV     A  +L+E++
Sbjct: 652 NESTHHALVLGLEGKRFVNSETHASMLLEEII 683



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/152 (29%), Positives = 74/152 (48%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A +    M   G H ++   +  I+ YC  GY +K   LL  M   G +  +V +TV ID
Sbjct: 255 AREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFID 314

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
             CK G LK A  +   ++  G+  D V+ +S++DG+ K G   +A +L+ + RL    P
Sbjct: 315 KLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL---RP 371

Query: 100 NVASYNIIVHGLVKRGFVMEARAILDELVRRG 5
           N+  Y+  +  +   G ++ A  I  E+   G
Sbjct: 372 NIFVYSSFLSNICSTGDMLRASTIFQEIFELG 403



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/141 (26%), Positives = 64/141 (45%)
 Frame = -3

Query: 460 AHKLFHEMSELGIHPDSCSYTTIIKGYCGVGYLNKALMLLGQMLKNGFKLAVVTYTVLID 281
           A KL +++ + GI P      +++K    V  L  A   +  ML  G  L     ++ I 
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279

Query: 280 SYCKIGDLKSADYLFRMIEREGLRPDVVTYNSLMDGYSKKGYLHKAFELVDTMRLADVSP 101
            YC  G       L   ++  G+RPD+V +   +D   K G+L +A  ++  ++L  +S 
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339

Query: 100 NVASYNIIVHGLVKRGFVMEA 38
           +  S + ++ G  K G   EA
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEA 360