BLASTX nr result
ID: Coptis21_contig00032886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00032886
(586 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group] 82 7e-20
gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indi... 82 7e-20
ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] g... 82 7e-20
ref|XP_003561383.1| PREDICTED: uncharacterized protein LOC100823... 79 2e-19
gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ... 81 3e-19
>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
Length = 2367
Score = 81.6 bits (200), Expect(2) = 7e-20
Identities = 44/130 (33%), Positives = 73/130 (56%)
Frame = +3
Query: 180 MKMKY*PPQDFMRATVHRSTSKSWKLMHYLWNLMARGLNWKVGDGLSIRVWLDAWMPRTP 359
+K KY P + + ++S +W+ + Y +L+ +G+ W+VG+G SIR+W D+W+PR
Sbjct: 1619 LKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDH 1678
Query: 360 SPLPLLDQPHNCNLDRVSDFIDPLTKQWRQDLVRPFWPSDYAKIILSIPISLDHEHDRRI 539
S P+ + NC L VSD I W + ++ + A++IL+I IS E D
Sbjct: 1679 SRRPITGKA-NCRLKWVSDLITE-DGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIA 1736
Query: 540 WSPNKYGMYT 569
W P+K GM++
Sbjct: 1737 WHPDKNGMFS 1746
Score = 40.8 bits (94), Expect(2) = 7e-20
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 FFWCHEVGELRLHYFSWDLACSPLKGGGLGIKDIQIQNFALLGKKA*DLIE-PTSLWA 172
F+W G+ + H+ +WD P GGLG +D ++ N ALL ++A LI P SL A
Sbjct: 1559 FWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQAWRLITYPDSLCA 1616
>gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
Length = 1765
Score = 81.6 bits (200), Expect(2) = 7e-20
Identities = 44/130 (33%), Positives = 73/130 (56%)
Frame = +3
Query: 180 MKMKY*PPQDFMRATVHRSTSKSWKLMHYLWNLMARGLNWKVGDGLSIRVWLDAWMPRTP 359
+K KY P + + ++S +W+ + Y +L+ +G+ W+VG+G SIR+W D+W+PR
Sbjct: 1342 LKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDH 1401
Query: 360 SPLPLLDQPHNCNLDRVSDFIDPLTKQWRQDLVRPFWPSDYAKIILSIPISLDHEHDRRI 539
S P+ + NC L VSD I W + ++ + A++IL+I IS E D
Sbjct: 1402 SRRPITGKA-NCRLKWVSDLITE-DGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIA 1459
Query: 540 WSPNKYGMYT 569
W P+K GM++
Sbjct: 1460 WHPDKNGMFS 1469
Score = 40.8 bits (94), Expect(2) = 7e-20
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 FFWCHEVGELRLHYFSWDLACSPLKGGGLGIKDIQIQNFALLGKKA*DLIE-PTSLWA 172
F+W G+ + H+ +WD P GGLG +D ++ N ALL ++A LI P SL A
Sbjct: 1282 FWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQAWRLITYPDSLCA 1339
>ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group]
gi|108862221|gb|ABA96496.2| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza
sativa Japonica Group]
Length = 1764
Score = 81.6 bits (200), Expect(2) = 7e-20
Identities = 44/130 (33%), Positives = 73/130 (56%)
Frame = +3
Query: 180 MKMKY*PPQDFMRATVHRSTSKSWKLMHYLWNLMARGLNWKVGDGLSIRVWLDAWMPRTP 359
+K KY P + + ++S +W+ + Y +L+ +G+ W+VG+G SIR+W D+W+PR
Sbjct: 1016 LKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDSWLPRDH 1075
Query: 360 SPLPLLDQPHNCNLDRVSDFIDPLTKQWRQDLVRPFWPSDYAKIILSIPISLDHEHDRRI 539
S P+ + NC L VSD I W + ++ + A++IL+I IS E D
Sbjct: 1076 SRRPITGKA-NCRLKWVSDLITE-DGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIA 1133
Query: 540 WSPNKYGMYT 569
W P+K GM++
Sbjct: 1134 WHPDKNGMFS 1143
Score = 40.8 bits (94), Expect(2) = 7e-20
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 FFWCHEVGELRLHYFSWDLACSPLKGGGLGIKDIQIQNFALLGKKA*DLIE-PTSLWA 172
F+W G+ + H+ +WD P GGLG +D ++ N ALL ++A LI P SL A
Sbjct: 956 FWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQALLARQAWRLITYPDSLCA 1013
>ref|XP_003561383.1| PREDICTED: uncharacterized protein LOC100823728 [Brachypodium
distachyon]
Length = 865
Score = 79.0 bits (193), Expect(2) = 2e-19
Identities = 41/129 (31%), Positives = 70/129 (54%)
Frame = +3
Query: 180 MKMKY*PPQDFMRATVHRSTSKSWKLMHYLWNLMARGLNWKVGDGLSIRVWLDAWMPRTP 359
++ KY P + + + S SWK + + L+ +G+ W++GDG +R+W D W+PR
Sbjct: 400 LRTKYYPEGNIVDTIFTGNASSSWKAIEHGLELLKKGVIWRIGDGSKVRIWRDPWIPRVF 459
Query: 360 SPLPLLDQPHNCNLDRVSDFIDPLTKQWRQDLVRPFWPSDYAKIILSIPISLDHEHDRRI 539
S P+ + ++C L VSD ++P + + R F P D ++ IL I S+ H D
Sbjct: 460 SMKPITQRGNSC-LKWVSDLLEPNGEWDITKINRCFLPIDRSE-ILKIKTSIMHGEDILA 517
Query: 540 WSPNKYGMY 566
W P++YG +
Sbjct: 518 WQPDRYGRF 526
Score = 42.0 bits (97), Expect(2) = 2e-19
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 FFWCHEVGELRLHYFSWDLACSPLKGGGLGIKDIQIQNFALLGKKA*DLIE-PTSLWA 172
++W + G+ ++ + +WD P GG+G +D+Q+ N ALL K++ LI+ P SL A
Sbjct: 340 YWWGKKDGKRKMPWIAWDSMMRPKSHGGIGFRDMQLFNQALLAKQSWRLIQKPDSLCA 397
>gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
gi|31433076|gb|AAP54636.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 791
Score = 80.9 bits (198), Expect(2) = 3e-19
Identities = 44/130 (33%), Positives = 72/130 (55%)
Frame = +3
Query: 180 MKMKY*PPQDFMRATVHRSTSKSWKLMHYLWNLMARGLNWKVGDGLSIRVWLDAWMPRTP 359
+K KY P + + ++S +W+ + Y +L+ +G+ W+VG+G SIR+W D W+PR
Sbjct: 295 LKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIWRVGNGNSIRIWRDPWLPRDH 354
Query: 360 SPLPLLDQPHNCNLDRVSDFIDPLTKQWRQDLVRPFWPSDYAKIILSIPISLDHEHDRRI 539
S P+ + NC L VSD I W + ++ + A++IL+I IS E D
Sbjct: 355 SRRPITGKA-NCRLKWVSDLITE-DGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIA 412
Query: 540 WSPNKYGMYT 569
W P+K GM++
Sbjct: 413 WHPDKNGMFS 422
Score = 39.7 bits (91), Expect(2) = 3e-19
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 2 FFWCHEVGELRLHYFSWDLACSPLKGGGLGIKDIQIQNFALLGKKA*DLIE-PTSLWA 172
F+W G+ + H+ +WD P GGLG +D + N ALL ++A LI P SL A
Sbjct: 235 FWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYWLFNQALLARQAWRLITYPDSLCA 292