BLASTX nr result

ID: Coptis21_contig00032876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032876
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   308   5e-82
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   292   4e-77
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   290   3e-76
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...   288   6e-76
ref|NP_176883.5| AAA ATPase containing von Willebrand factor typ...   286   3e-75

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  308 bits (790), Expect = 5e-82
 Identities = 159/226 (70%), Positives = 182/226 (80%), Gaps = 2/226 (0%)
 Frame = -2

Query: 700  LREQCLSFLLQSLKSDIHSEDSQLSQLQTFGWDAIGRSEESLLDNVVQSDKYFGIAPFNI 521
            LRE CLSFL++ LK    S    L  ++ + W  +G + +S   N +Q D +FGI PF I
Sbjct: 1596 LRENCLSFLVEQLKVFFWSLLHSL--MENYSWGDLGTTADSSCSNNMQLDNHFGIHPFYI 1653

Query: 520  SKGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHR 341
             KGD  C+ +GFEFLAPTTC+NA RVLRAMQL KPVLLEGSPGVGKTSLIVA+GK+SGH 
Sbjct: 1654 EKGDQSCEIKGFEFLAPTTCKNAFRVLRAMQLAKPVLLEGSPGVGKTSLIVALGKFSGHP 1713

Query: 340  VVRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVL 161
            VVRINLSEQTDIMDLLGSDLPVE +EG++FAWSDGILLQALK G WVLLDELNLAPQSVL
Sbjct: 1714 VVRINLSEQTDIMDLLGSDLPVESSEGIKFAWSDGILLQALKQGSWVLLDELNLAPQSVL 1773

Query: 160  EGLNAILDHRAEVFIPELGQTYKCPTSFRVFA--HPDKKDFGRQTL 29
            EGLNAILDHRAEVFIPELG T+KCP+SFRVFA  +P  +  GR+ L
Sbjct: 1774 EGLNAILDHRAEVFIPELGVTFKCPSSFRVFACQNPSSQGGGRKGL 1819



 Score =  109 bits (273), Expect = 5e-22
 Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
 Frame = -2

Query: 424  RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
            R PVLL+G    GKTSL+  +   +GH  VRIN  E TD+ + LGS   V DA G +  +
Sbjct: 1098 RYPVLLQGPTSSGKTSLVQYLAAITGHEFVRINNHEHTDLQEYLGSY--VTDASG-KLVF 1154

Query: 244  SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
             +G+L++A++NG W++LDELNLAP  VLE LN +LD   E+F+PEL +T      F +FA
Sbjct: 1155 HEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELRETIPAHPDFMLFA 1214

Query: 64   --HPDKKDFGRQTLGK 23
              +P     GR+ L +
Sbjct: 1215 TQNPPTLYGGRKMLSR 1230



 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 47/127 (37%), Positives = 72/127 (56%)
 Frame = -2

Query: 445 VLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 266
           VL A+  + PVLL G  GVGKT+LI  + + SG++V+ I++ +Q D   L+GS + +E  
Sbjct: 359 VLLAVSQKWPVLLYGPAGVGKTALISKLARDSGNQVLSIHMDDQIDGKTLIGSYVCME-- 416

Query: 265 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 86
               F W  G L QA  NG WV+ + ++ AP  V   L  +L+  A  F+   G+  +  
Sbjct: 417 RPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQSILLPLLE-GASSFLTSHGEAIRVA 475

Query: 85  TSFRVFA 65
            SFR+F+
Sbjct: 476 ESFRLFS 482


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  292 bits (748), Expect = 4e-77
 Identities = 153/228 (67%), Positives = 179/228 (78%), Gaps = 2/228 (0%)
 Frame = -2

Query: 700  LREQCLSFLLQSLKSDIHSEDSQLSQLQTFGWDAIGRSEESLLDNVVQSDKYFGIAPFNI 521
            L E+CLSFL++ L+          S +  +GW  +  + +  L + +  D  FGI+PF +
Sbjct: 1580 LMEKCLSFLVKQLQVFFFFLKI-FSAMGNYGWGNLETTPDISLTDDMLCDNVFGISPFYV 1638

Query: 520  SKGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHR 341
             KG + C+  GFEFLAPTT RNA+RVLRAMQL KPVLLEGSPGVGKTSLI+A+GKYSGH+
Sbjct: 1639 EKGSETCETSGFEFLAPTTRRNALRVLRAMQLPKPVLLEGSPGVGKTSLIIALGKYSGHK 1698

Query: 340  VVRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVL 161
            VVRINLSEQTD+MDLLGSDLPVE  EGM+FAWSDGILLQALK G WVLLDELNLAPQSVL
Sbjct: 1699 VVRINLSEQTDLMDLLGSDLPVESDEGMKFAWSDGILLQALKEGCWVLLDELNLAPQSVL 1758

Query: 160  EGLNAILDHRAEVFIPELGQTYKCPTSFRVFA--HPDKKDFGRQTLGK 23
            EGLNAILDHRAEVFIPELG T+KCP+SFRVFA  +P  +  GR+ L K
Sbjct: 1759 EGLNAILDHRAEVFIPELGLTFKCPSSFRVFACQNPFSQGGGRKGLPK 1806



 Score =  114 bits (285), Expect = 2e-23
 Identities = 62/136 (45%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
 Frame = -2

Query: 424  RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
            R PVLL+G    GKTSL+  +   SGH  VRIN  E TD+ + LGS   + DA G +  +
Sbjct: 1085 RYPVLLQGPTSSGKTSLVQYLAAKSGHEFVRINNHEHTDLQEYLGSY--ISDAHG-KLIF 1141

Query: 244  SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
             +G+L++A++NG W++LDELNLAP  VLE LN +LD   E+F+PEL QT +   +F +FA
Sbjct: 1142 QEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELRQTIRAHPNFMLFA 1201

Query: 64   HPDKKDF--GRQTLGK 23
              +   F  GR+ L +
Sbjct: 1202 TQNPPTFYGGRKMLSR 1217



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 51/138 (36%), Positives = 78/138 (56%)
 Frame = -2

Query: 478 LAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMD 299
           L  T  R+   VL A+  R P+LL G  G GKT+LI  + + SG++V+ I++ EQ D   
Sbjct: 337 LTSTVKRSFEMVLLAVSQRWPILLYGPAGAGKTALISKLAQDSGNQVLTIHMDEQIDGKT 396

Query: 298 LLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVF 119
           L+G+ +  E  +   F W  G L+QA+ NG WV+ ++++ AP  V   L  +L+  A  F
Sbjct: 397 LIGTYVCAE--QPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQSILLPLLE-GASFF 453

Query: 118 IPELGQTYKCPTSFRVFA 65
           I   G+    P SFR+F+
Sbjct: 454 ITGHGEEITVPESFRLFS 471


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  290 bits (741), Expect = 3e-76
 Identities = 153/227 (67%), Positives = 177/227 (77%), Gaps = 2/227 (0%)
 Frame = -2

Query: 697  REQCLSFLLQSLKSDIHSEDSQLSQLQTFGWDAIGRSEESLLDNVVQSDKYFGIAPFNIS 518
            RE CLSFLL+ LK D  S   +LS ++ +GW  +G +      + +Q D  FGI PF I 
Sbjct: 1659 RETCLSFLLKELKED--SNLHELSFIENYGWGDLGETGNISCSDDMQCDNSFGIDPFYIE 1716

Query: 517  KGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRV 338
            KG + C+  GFEFL PTT RNA+RVLRAMQL KPVLLEGSPGVGKTSLI+A+GKYSGH+V
Sbjct: 1717 KGYEKCEAGGFEFLTPTTRRNALRVLRAMQLPKPVLLEGSPGVGKTSLIIALGKYSGHKV 1776

Query: 337  VRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLE 158
            VRINLSEQTD+MDLLG+DLPVE  EGM+FAWSDGILLQALK G WVLLDELNLAPQS   
Sbjct: 1777 VRINLSEQTDLMDLLGTDLPVESDEGMKFAWSDGILLQALKEGCWVLLDELNLAPQS--- 1833

Query: 157  GLNAILDHRAEVFIPELGQTYKCPTSFRVFA--HPDKKDFGRQTLGK 23
            GLNAILDHRAEVFIPEL  T+KCP+SFR+FA  +P  +  GR+ L K
Sbjct: 1834 GLNAILDHRAEVFIPELSLTFKCPSSFRIFACQNPFSQGGGRKGLPK 1880



 Score =  114 bits (284), Expect = 2e-23
 Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
 Frame = -2

Query: 424  RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
            R PVLL+G    GKTSL+  +   +GH  VRIN  E TD+ + LGS   + DA+G +  +
Sbjct: 1075 RYPVLLQGPTSSGKTSLVQYLAARTGHEFVRINNHEHTDLQEYLGSY--ISDAQG-KLVF 1131

Query: 244  SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
             +GIL++A++NG W++LDELNLAP  VLE LN +LD   E+F+PEL +T +   +F +FA
Sbjct: 1132 QEGILVKAVRNGHWIVLDELNLAPSDVLEALNRLLDDNRELFLPELRETVRAHPNFMLFA 1191

Query: 64   HPDKKDF--GRQTLGK 23
              +   F  GR+ L +
Sbjct: 1192 TQNPPTFYGGRKMLSR 1207



 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 45/127 (35%), Positives = 74/127 (58%)
 Frame = -2

Query: 445 VLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 266
           VL A+  + PVLL G PG GKT+LI  + + +G++V+ I++ +Q D   L+GS +  E  
Sbjct: 348 VLLAVSQKWPVLLYGPPGAGKTALINKLAQDAGNQVLSIHMDDQIDGKTLIGSYVCTE-- 405

Query: 265 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 86
           +   F W  G L+QA+ NG WV+ ++++ AP  V   L  +L+     FI   G+  +  
Sbjct: 406 QPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQSILLPLLEGEI-AFITSHGEEIRVA 464

Query: 85  TSFRVFA 65
            SF++F+
Sbjct: 465 ESFQLFS 471


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score =  288 bits (738), Expect = 6e-76
 Identities = 158/251 (62%), Positives = 182/251 (72%), Gaps = 27/251 (10%)
 Frame = -2

Query: 700  LREQCLSFLLQSLK--------------------SDIHSED-----SQLSQLQTFGWDAI 596
            LRE+CLSFLLQ L+                    S++  ++     S+LS++  +GW   
Sbjct: 1242 LRERCLSFLLQKLRRLVGRTSYATHLLFGFDAFWSELWVDESNLLYSKLSRMGNYGWGEY 1301

Query: 595  GRSEESLLDNVVQSDKYFGIAPFNISKGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKP 416
            G + +    +  Q D  FGI PF I+KG   C+  GFEF APTT RNA RVLRAMQL KP
Sbjct: 1302 GTNVDVSHSDDKQHDDLFGIDPFYITKGFSSCEDGGFEFKAPTTRRNASRVLRAMQLPKP 1361

Query: 415  VLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDG 236
            VLLEGSPGVGKTSLI A+GKYSGH+VVRINLSEQTD+MDLLGSDLPVE  EGM+F+WSDG
Sbjct: 1362 VLLEGSPGVGKTSLITALGKYSGHKVVRINLSEQTDMMDLLGSDLPVESDEGMKFSWSDG 1421

Query: 235  ILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA--H 62
            ILLQAL+ G WVLLDELNLAPQSVLEGLNAILDHRAEVFIPELG TYKCP SFRVFA  +
Sbjct: 1422 ILLQALQEGCWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGNTYKCPPSFRVFACQN 1481

Query: 61   PDKKDFGRQTL 29
            P  +  GR+ L
Sbjct: 1482 PSHQGGGRKGL 1492



 Score =  112 bits (279), Expect = 9e-23
 Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
 Frame = -2

Query: 424 RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
           R PVLL+G    GKTSL+  +   +GH  VRIN  E TD+ + LGS   + DA G +  +
Sbjct: 587 RYPVLLQGPTSSGKTSLVQYLASITGHEFVRINNHEHTDLQEYLGSY--ITDASG-KLVF 643

Query: 244 SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
           ++G+L++A++NG W++LDELNLAP  VLE LN +LD   E+F+PEL +T K   +F +F 
Sbjct: 644 NEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELQETIKAHPNFMLFG 703

Query: 64  --HPDKKDFGRQTLGK 23
             +P     GR+ L +
Sbjct: 704 TQNPPTHYGGRKMLSR 719


>ref|NP_176883.5| AAA ATPase containing von Willebrand factor type A domain-containing
            protein [Arabidopsis thaliana]
            gi|332196477|gb|AEE34598.1| AAA ATPase containing von
            Willebrand factor type A domain-containing protein
            [Arabidopsis thaliana]
          Length = 5393

 Score =  286 bits (732), Expect = 3e-75
 Identities = 154/232 (66%), Positives = 186/232 (80%), Gaps = 6/232 (2%)
 Frame = -2

Query: 700  LREQCLSFLLQSLKSDIHSEDS---QLSQLQTFGW-DAIGRSEESLLDNVVQSDKYFGIA 533
            LRE+C +FLLQ L  ++ + D+   +LS+++ +GW D+    E+S     V+ +  FGI 
Sbjct: 1688 LREKCFAFLLQQL--ELFASDTLPLELSRMELYGWGDSKAICEKS---KSVRHEGMFGID 1742

Query: 532  PFNISKGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKY 353
            PF ISKGD++ +  GFEFLAPTT RN +RVLRAMQL KP+LLEGSPGVGKTSLI+A+GKY
Sbjct: 1743 PFFISKGDENPEIGGFEFLAPTTHRNVLRVLRAMQLSKPILLEGSPGVGKTSLILALGKY 1802

Query: 352  SGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAP 173
            SGH+VVRINLSEQTD+MDLLGSDLPVE  E M+FAWSDGILLQALK G WVLLDELNLAP
Sbjct: 1803 SGHKVVRINLSEQTDMMDLLGSDLPVESDEDMKFAWSDGILLQALKEGSWVLLDELNLAP 1862

Query: 172  QSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA--HPDKKDFGRQTLGK 23
            QSVLEGLNAILDHRA+VFIPELG T++CP +FRVFA  +P  +  GR+ L K
Sbjct: 1863 QSVLEGLNAILDHRAQVFIPELGCTFECPPTFRVFACQNPSTQGGGRKGLPK 1914



 Score =  108 bits (269), Expect = 1e-21
 Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
 Frame = -2

Query: 424  RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
            R PVLL+G    GKTSL+  +   SG++ VRIN  EQTDI + LGS +   D+ G +  +
Sbjct: 1072 RYPVLLQGPTSSGKTSLVKYLAAISGNKFVRINNHEQTDIQEYLGSYMT--DSSG-KLVF 1128

Query: 244  SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
             +G L++A++ G W++LDELNLAP  VLE LN +LD   E+F+PEL +T     +F +FA
Sbjct: 1129 HEGALVKAVRGGHWIVLDELNLAPSDVLEALNRLLDDNRELFVPELSETISAHPNFMLFA 1188

Query: 64   --HPDKKDFGRQTLGK 23
              +P     GR+ L +
Sbjct: 1189 TQNPPTLYGGRKILSR 1204



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 42/124 (33%), Positives = 71/124 (57%)
 Frame = -2

Query: 436 AMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGM 257
           A+  ++PVLL G  G GK++LI  +   SG+ VV I++ +Q D   L+G+ +   D  G 
Sbjct: 349 AVSQKRPVLLYGPSGSGKSALIRKLADESGNHVVFIHMDDQLDGKTLVGTYV-CTDQPG- 406

Query: 256 RFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSF 77
            F W  G L QA+ NG WV+L++++ AP  V   L+++L      F+   G+  +   +F
Sbjct: 407 EFRWQPGSLTQAIMNGFWVVLEDIDKAPSDVPLVLSSLLGGSCS-FLTSQGEEIRIAETF 465

Query: 76  RVFA 65
           ++F+
Sbjct: 466 QLFS 469



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 25/66 (37%), Positives = 44/66 (66%)
 Frame = -2

Query: 469 TTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLG 290
           T+ R   ++ R+++  +PVLL G  G GKT+L+  +  + G ++  +NLS+Q+DI+DLLG
Sbjct: 652 TSTRLLEKIARSVEYNEPVLLVGETGTGKTTLVQNLAHWIGQKLTVLNLSQQSDIVDLLG 711

Query: 289 SDLPVE 272
              P++
Sbjct: 712 GFKPID 717


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