BLASTX nr result
ID: Coptis21_contig00032876
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00032876
(701 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like... 308 5e-82
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu... 292 4e-77
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2... 290 3e-76
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g... 288 6e-76
ref|NP_176883.5| AAA ATPase containing von Willebrand factor typ... 286 3e-75
>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
Length = 5286
Score = 308 bits (790), Expect = 5e-82
Identities = 159/226 (70%), Positives = 182/226 (80%), Gaps = 2/226 (0%)
Frame = -2
Query: 700 LREQCLSFLLQSLKSDIHSEDSQLSQLQTFGWDAIGRSEESLLDNVVQSDKYFGIAPFNI 521
LRE CLSFL++ LK S L ++ + W +G + +S N +Q D +FGI PF I
Sbjct: 1596 LRENCLSFLVEQLKVFFWSLLHSL--MENYSWGDLGTTADSSCSNNMQLDNHFGIHPFYI 1653
Query: 520 SKGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHR 341
KGD C+ +GFEFLAPTTC+NA RVLRAMQL KPVLLEGSPGVGKTSLIVA+GK+SGH
Sbjct: 1654 EKGDQSCEIKGFEFLAPTTCKNAFRVLRAMQLAKPVLLEGSPGVGKTSLIVALGKFSGHP 1713
Query: 340 VVRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVL 161
VVRINLSEQTDIMDLLGSDLPVE +EG++FAWSDGILLQALK G WVLLDELNLAPQSVL
Sbjct: 1714 VVRINLSEQTDIMDLLGSDLPVESSEGIKFAWSDGILLQALKQGSWVLLDELNLAPQSVL 1773
Query: 160 EGLNAILDHRAEVFIPELGQTYKCPTSFRVFA--HPDKKDFGRQTL 29
EGLNAILDHRAEVFIPELG T+KCP+SFRVFA +P + GR+ L
Sbjct: 1774 EGLNAILDHRAEVFIPELGVTFKCPSSFRVFACQNPSSQGGGRKGL 1819
Score = 109 bits (273), Expect = 5e-22
Identities = 61/136 (44%), Positives = 85/136 (62%), Gaps = 2/136 (1%)
Frame = -2
Query: 424 RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
R PVLL+G GKTSL+ + +GH VRIN E TD+ + LGS V DA G + +
Sbjct: 1098 RYPVLLQGPTSSGKTSLVQYLAAITGHEFVRINNHEHTDLQEYLGSY--VTDASG-KLVF 1154
Query: 244 SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
+G+L++A++NG W++LDELNLAP VLE LN +LD E+F+PEL +T F +FA
Sbjct: 1155 HEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELRETIPAHPDFMLFA 1214
Query: 64 --HPDKKDFGRQTLGK 23
+P GR+ L +
Sbjct: 1215 TQNPPTLYGGRKMLSR 1230
Score = 75.1 bits (183), Expect = 1e-11
Identities = 47/127 (37%), Positives = 72/127 (56%)
Frame = -2
Query: 445 VLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 266
VL A+ + PVLL G GVGKT+LI + + SG++V+ I++ +Q D L+GS + +E
Sbjct: 359 VLLAVSQKWPVLLYGPAGVGKTALISKLARDSGNQVLSIHMDDQIDGKTLIGSYVCME-- 416
Query: 265 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 86
F W G L QA NG WV+ + ++ AP V L +L+ A F+ G+ +
Sbjct: 417 RPGEFRWQPGSLTQAAMNGFWVVFEGIDKAPSDVQSILLPLLE-GASSFLTSHGEAIRVA 475
Query: 85 TSFRVFA 65
SFR+F+
Sbjct: 476 ESFRLFS 482
>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
gi|223539440|gb|EEF41030.1| ATP binding protein, putative
[Ricinus communis]
Length = 5282
Score = 292 bits (748), Expect = 4e-77
Identities = 153/228 (67%), Positives = 179/228 (78%), Gaps = 2/228 (0%)
Frame = -2
Query: 700 LREQCLSFLLQSLKSDIHSEDSQLSQLQTFGWDAIGRSEESLLDNVVQSDKYFGIAPFNI 521
L E+CLSFL++ L+ S + +GW + + + L + + D FGI+PF +
Sbjct: 1580 LMEKCLSFLVKQLQVFFFFLKI-FSAMGNYGWGNLETTPDISLTDDMLCDNVFGISPFYV 1638
Query: 520 SKGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHR 341
KG + C+ GFEFLAPTT RNA+RVLRAMQL KPVLLEGSPGVGKTSLI+A+GKYSGH+
Sbjct: 1639 EKGSETCETSGFEFLAPTTRRNALRVLRAMQLPKPVLLEGSPGVGKTSLIIALGKYSGHK 1698
Query: 340 VVRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVL 161
VVRINLSEQTD+MDLLGSDLPVE EGM+FAWSDGILLQALK G WVLLDELNLAPQSVL
Sbjct: 1699 VVRINLSEQTDLMDLLGSDLPVESDEGMKFAWSDGILLQALKEGCWVLLDELNLAPQSVL 1758
Query: 160 EGLNAILDHRAEVFIPELGQTYKCPTSFRVFA--HPDKKDFGRQTLGK 23
EGLNAILDHRAEVFIPELG T+KCP+SFRVFA +P + GR+ L K
Sbjct: 1759 EGLNAILDHRAEVFIPELGLTFKCPSSFRVFACQNPFSQGGGRKGLPK 1806
Score = 114 bits (285), Expect = 2e-23
Identities = 62/136 (45%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Frame = -2
Query: 424 RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
R PVLL+G GKTSL+ + SGH VRIN E TD+ + LGS + DA G + +
Sbjct: 1085 RYPVLLQGPTSSGKTSLVQYLAAKSGHEFVRINNHEHTDLQEYLGSY--ISDAHG-KLIF 1141
Query: 244 SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
+G+L++A++NG W++LDELNLAP VLE LN +LD E+F+PEL QT + +F +FA
Sbjct: 1142 QEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELRQTIRAHPNFMLFA 1201
Query: 64 HPDKKDF--GRQTLGK 23
+ F GR+ L +
Sbjct: 1202 TQNPPTFYGGRKMLSR 1217
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/138 (36%), Positives = 78/138 (56%)
Frame = -2
Query: 478 LAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMD 299
L T R+ VL A+ R P+LL G G GKT+LI + + SG++V+ I++ EQ D
Sbjct: 337 LTSTVKRSFEMVLLAVSQRWPILLYGPAGAGKTALISKLAQDSGNQVLTIHMDEQIDGKT 396
Query: 298 LLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVF 119
L+G+ + E + F W G L+QA+ NG WV+ ++++ AP V L +L+ A F
Sbjct: 397 LIGTYVCAE--QPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQSILLPLLE-GASFF 453
Query: 118 IPELGQTYKCPTSFRVFA 65
I G+ P SFR+F+
Sbjct: 454 ITGHGEEITVPESFRLFS 471
>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
predicted protein [Populus trichocarpa]
Length = 5317
Score = 290 bits (741), Expect = 3e-76
Identities = 153/227 (67%), Positives = 177/227 (77%), Gaps = 2/227 (0%)
Frame = -2
Query: 697 REQCLSFLLQSLKSDIHSEDSQLSQLQTFGWDAIGRSEESLLDNVVQSDKYFGIAPFNIS 518
RE CLSFLL+ LK D S +LS ++ +GW +G + + +Q D FGI PF I
Sbjct: 1659 RETCLSFLLKELKED--SNLHELSFIENYGWGDLGETGNISCSDDMQCDNSFGIDPFYIE 1716
Query: 517 KGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRV 338
KG + C+ GFEFL PTT RNA+RVLRAMQL KPVLLEGSPGVGKTSLI+A+GKYSGH+V
Sbjct: 1717 KGYEKCEAGGFEFLTPTTRRNALRVLRAMQLPKPVLLEGSPGVGKTSLIIALGKYSGHKV 1776
Query: 337 VRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLE 158
VRINLSEQTD+MDLLG+DLPVE EGM+FAWSDGILLQALK G WVLLDELNLAPQS
Sbjct: 1777 VRINLSEQTDLMDLLGTDLPVESDEGMKFAWSDGILLQALKEGCWVLLDELNLAPQS--- 1833
Query: 157 GLNAILDHRAEVFIPELGQTYKCPTSFRVFA--HPDKKDFGRQTLGK 23
GLNAILDHRAEVFIPEL T+KCP+SFR+FA +P + GR+ L K
Sbjct: 1834 GLNAILDHRAEVFIPELSLTFKCPSSFRIFACQNPFSQGGGRKGLPK 1880
Score = 114 bits (284), Expect = 2e-23
Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
Frame = -2
Query: 424 RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
R PVLL+G GKTSL+ + +GH VRIN E TD+ + LGS + DA+G + +
Sbjct: 1075 RYPVLLQGPTSSGKTSLVQYLAARTGHEFVRINNHEHTDLQEYLGSY--ISDAQG-KLVF 1131
Query: 244 SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
+GIL++A++NG W++LDELNLAP VLE LN +LD E+F+PEL +T + +F +FA
Sbjct: 1132 QEGILVKAVRNGHWIVLDELNLAPSDVLEALNRLLDDNRELFLPELRETVRAHPNFMLFA 1191
Query: 64 HPDKKDF--GRQTLGK 23
+ F GR+ L +
Sbjct: 1192 TQNPPTFYGGRKMLSR 1207
Score = 75.9 bits (185), Expect = 7e-12
Identities = 45/127 (35%), Positives = 74/127 (58%)
Frame = -2
Query: 445 VLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDA 266
VL A+ + PVLL G PG GKT+LI + + +G++V+ I++ +Q D L+GS + E
Sbjct: 348 VLLAVSQKWPVLLYGPPGAGKTALINKLAQDAGNQVLSIHMDDQIDGKTLIGSYVCTE-- 405
Query: 265 EGMRFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCP 86
+ F W G L+QA+ NG WV+ ++++ AP V L +L+ FI G+ +
Sbjct: 406 QPGEFRWQPGSLIQAVLNGYWVVFEDIDKAPSDVQSILLPLLEGEI-AFITSHGEEIRVA 464
Query: 85 TSFRVFA 65
SF++F+
Sbjct: 465 ESFQLFS 471
>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
[Medicago truncatula]
Length = 5078
Score = 288 bits (738), Expect = 6e-76
Identities = 158/251 (62%), Positives = 182/251 (72%), Gaps = 27/251 (10%)
Frame = -2
Query: 700 LREQCLSFLLQSLK--------------------SDIHSED-----SQLSQLQTFGWDAI 596
LRE+CLSFLLQ L+ S++ ++ S+LS++ +GW
Sbjct: 1242 LRERCLSFLLQKLRRLVGRTSYATHLLFGFDAFWSELWVDESNLLYSKLSRMGNYGWGEY 1301
Query: 595 GRSEESLLDNVVQSDKYFGIAPFNISKGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKP 416
G + + + Q D FGI PF I+KG C+ GFEF APTT RNA RVLRAMQL KP
Sbjct: 1302 GTNVDVSHSDDKQHDDLFGIDPFYITKGFSSCEDGGFEFKAPTTRRNASRVLRAMQLPKP 1361
Query: 415 VLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDG 236
VLLEGSPGVGKTSLI A+GKYSGH+VVRINLSEQTD+MDLLGSDLPVE EGM+F+WSDG
Sbjct: 1362 VLLEGSPGVGKTSLITALGKYSGHKVVRINLSEQTDMMDLLGSDLPVESDEGMKFSWSDG 1421
Query: 235 ILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA--H 62
ILLQAL+ G WVLLDELNLAPQSVLEGLNAILDHRAEVFIPELG TYKCP SFRVFA +
Sbjct: 1422 ILLQALQEGCWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGNTYKCPPSFRVFACQN 1481
Query: 61 PDKKDFGRQTL 29
P + GR+ L
Sbjct: 1482 PSHQGGGRKGL 1492
Score = 112 bits (279), Expect = 9e-23
Identities = 60/136 (44%), Positives = 87/136 (63%), Gaps = 2/136 (1%)
Frame = -2
Query: 424 RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
R PVLL+G GKTSL+ + +GH VRIN E TD+ + LGS + DA G + +
Sbjct: 587 RYPVLLQGPTSSGKTSLVQYLASITGHEFVRINNHEHTDLQEYLGSY--ITDASG-KLVF 643
Query: 244 SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
++G+L++A++NG W++LDELNLAP VLE LN +LD E+F+PEL +T K +F +F
Sbjct: 644 NEGVLVKAVRNGYWIVLDELNLAPSDVLEALNRLLDDNRELFVPELQETIKAHPNFMLFG 703
Query: 64 --HPDKKDFGRQTLGK 23
+P GR+ L +
Sbjct: 704 TQNPPTHYGGRKMLSR 719
>ref|NP_176883.5| AAA ATPase containing von Willebrand factor type A domain-containing
protein [Arabidopsis thaliana]
gi|332196477|gb|AEE34598.1| AAA ATPase containing von
Willebrand factor type A domain-containing protein
[Arabidopsis thaliana]
Length = 5393
Score = 286 bits (732), Expect = 3e-75
Identities = 154/232 (66%), Positives = 186/232 (80%), Gaps = 6/232 (2%)
Frame = -2
Query: 700 LREQCLSFLLQSLKSDIHSEDS---QLSQLQTFGW-DAIGRSEESLLDNVVQSDKYFGIA 533
LRE+C +FLLQ L ++ + D+ +LS+++ +GW D+ E+S V+ + FGI
Sbjct: 1688 LREKCFAFLLQQL--ELFASDTLPLELSRMELYGWGDSKAICEKS---KSVRHEGMFGID 1742
Query: 532 PFNISKGDDDCKPEGFEFLAPTTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKY 353
PF ISKGD++ + GFEFLAPTT RN +RVLRAMQL KP+LLEGSPGVGKTSLI+A+GKY
Sbjct: 1743 PFFISKGDENPEIGGFEFLAPTTHRNVLRVLRAMQLSKPILLEGSPGVGKTSLILALGKY 1802
Query: 352 SGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAWSDGILLQALKNGDWVLLDELNLAP 173
SGH+VVRINLSEQTD+MDLLGSDLPVE E M+FAWSDGILLQALK G WVLLDELNLAP
Sbjct: 1803 SGHKVVRINLSEQTDMMDLLGSDLPVESDEDMKFAWSDGILLQALKEGSWVLLDELNLAP 1862
Query: 172 QSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA--HPDKKDFGRQTLGK 23
QSVLEGLNAILDHRA+VFIPELG T++CP +FRVFA +P + GR+ L K
Sbjct: 1863 QSVLEGLNAILDHRAQVFIPELGCTFECPPTFRVFACQNPSTQGGGRKGLPK 1914
Score = 108 bits (269), Expect = 1e-21
Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Frame = -2
Query: 424 RKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGMRFAW 245
R PVLL+G GKTSL+ + SG++ VRIN EQTDI + LGS + D+ G + +
Sbjct: 1072 RYPVLLQGPTSSGKTSLVKYLAAISGNKFVRINNHEQTDIQEYLGSYMT--DSSG-KLVF 1128
Query: 244 SDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSFRVFA 65
+G L++A++ G W++LDELNLAP VLE LN +LD E+F+PEL +T +F +FA
Sbjct: 1129 HEGALVKAVRGGHWIVLDELNLAPSDVLEALNRLLDDNRELFVPELSETISAHPNFMLFA 1188
Query: 64 --HPDKKDFGRQTLGK 23
+P GR+ L +
Sbjct: 1189 TQNPPTLYGGRKILSR 1204
Score = 68.2 bits (165), Expect = 2e-09
Identities = 42/124 (33%), Positives = 71/124 (57%)
Frame = -2
Query: 436 AMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLGSDLPVEDAEGM 257
A+ ++PVLL G G GK++LI + SG+ VV I++ +Q D L+G+ + D G
Sbjct: 349 AVSQKRPVLLYGPSGSGKSALIRKLADESGNHVVFIHMDDQLDGKTLVGTYV-CTDQPG- 406
Query: 256 RFAWSDGILLQALKNGDWVLLDELNLAPQSVLEGLNAILDHRAEVFIPELGQTYKCPTSF 77
F W G L QA+ NG WV+L++++ AP V L+++L F+ G+ + +F
Sbjct: 407 EFRWQPGSLTQAIMNGFWVVLEDIDKAPSDVPLVLSSLLGGSCS-FLTSQGEEIRIAETF 465
Query: 76 RVFA 65
++F+
Sbjct: 466 QLFS 469
Score = 56.2 bits (134), Expect = 6e-06
Identities = 25/66 (37%), Positives = 44/66 (66%)
Frame = -2
Query: 469 TTCRNAMRVLRAMQLRKPVLLEGSPGVGKTSLIVAIGKYSGHRVVRINLSEQTDIMDLLG 290
T+ R ++ R+++ +PVLL G G GKT+L+ + + G ++ +NLS+Q+DI+DLLG
Sbjct: 652 TSTRLLEKIARSVEYNEPVLLVGETGTGKTTLVQNLAHWIGQKLTVLNLSQQSDIVDLLG 711
Query: 289 SDLPVE 272
P++
Sbjct: 712 GFKPID 717