BLASTX nr result
ID: Coptis21_contig00032874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00032874
(705 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 64 9e-30
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 64 9e-30
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 59 1e-26
gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum] 63 2e-26
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 58 3e-26
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 64.3 bits (155), Expect(3) = 9e-30
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = +1
Query: 190 SLDMRSIAIGEKYLGTLLFLGQPKFEIFNGLISKVNNKIAGWKIKLLSQAARTVLIKSIS 369
SLD+ + A+ +KYLG +G K + F LI +VNN+I G K K+LS + VLIKSI+
Sbjct: 556 SLDIMTEALNDKYLGLPAMIGVDKSDCFRHLIDRVNNRINGRKEKMLSTGGKEVLIKSIA 615
Query: 370 SAIHLFHINIFLLP 411
AI +F +++F +P
Sbjct: 616 QAIPVFAMSVFRIP 629
Score = 60.8 bits (146), Expect(3) = 9e-30
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +2
Query: 446 FWWGTPQGKKHPVYLKSWNFIC*PKLNGGLGIRDMALSNHAHLCKIIWNIVTNRNSFLSQ 625
FWWG + + ++ K+W +C PK GGLG RD+ N A L K IW + + +S ++
Sbjct: 643 FWWGDDENHRR-IHWKAWWRMCIPKQRGGLGFRDLYCFNRAMLAKQIWRFLCDPDSLCAR 701
Query: 626 QLKGKYFPKCNVL 664
++ KY+P N+L
Sbjct: 702 VMRCKYYPDGNIL 714
Score = 51.6 bits (122), Expect(3) = 9e-30
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 3 ISHLLFADDAFIFCKANLNKARELLDALNTFCQITGQDINYTKSGVHFSKN 155
ISHLLFADD+ I +A+ N A L L+ +CQ +GQ I+ KS + FS+N
Sbjct: 494 ISHLLFADDSLILMQADKNNADHLKAILDIYCQNSGQKISEAKSSIFFSRN 544
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 64.3 bits (155), Expect(3) = 9e-30
Identities = 33/74 (44%), Positives = 49/74 (66%)
Frame = +1
Query: 190 SLDMRSIAIGEKYLGTLLFLGQPKFEIFNGLISKVNNKIAGWKIKLLSQAARTVLIKSIS 369
SLD+ + A+ +KYLG +G K + F LI +VNN+I G K K+LS + VLIKSI+
Sbjct: 556 SLDIMTEALNDKYLGLPAMIGVDKSDCFRHLIDRVNNRINGRKEKMLSTGGKEVLIKSIA 615
Query: 370 SAIHLFHINIFLLP 411
AI +F +++F +P
Sbjct: 616 QAIPVFAMSVFRIP 629
Score = 60.8 bits (146), Expect(3) = 9e-30
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +2
Query: 446 FWWGTPQGKKHPVYLKSWNFIC*PKLNGGLGIRDMALSNHAHLCKIIWNIVTNRNSFLSQ 625
FWWG + + ++ K+W +C PK GGLG RD+ N A L K IW + + +S ++
Sbjct: 643 FWWGDDENHRR-IHWKAWWRMCIPKQRGGLGFRDLYCFNRAMLAKQIWRFLCDPDSLCAR 701
Query: 626 QLKGKYFPKCNVL 664
++ KY+P N+L
Sbjct: 702 VMRCKYYPDGNIL 714
Score = 51.6 bits (122), Expect(3) = 9e-30
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 3 ISHLLFADDAFIFCKANLNKARELLDALNTFCQITGQDINYTKSGVHFSKN 155
ISHLLFADD+ I +A+ N A L L+ +CQ +GQ I+ KS + FS+N
Sbjct: 494 ISHLLFADDSLILMQADKNNADHLKAILDIYCQNSGQKISEAKSSIFFSRN 544
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 58.9 bits (141), Expect(3) = 1e-26
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +1
Query: 190 SLDMRSIAIGEKYLGTLLFLGQPKFEIFNGLISKVNNKIAGWKIKLLSQAARTVLIKSIS 369
+L+M+ EKYLG +F+G+ + +IF+ L ++ +I GWK KLLS+A + +LIK+++
Sbjct: 967 ALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVA 1026
Query: 370 SAIHLFHINIFLLPHHTVHQCS 435
AI F + F L Q S
Sbjct: 1027 QAIPTFAMGCFELTKDLCDQIS 1048
Score = 56.2 bits (134), Expect(3) = 1e-26
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +2
Query: 413 ITQSINALQRDFWWGTPQGKKHPVYLKSWNFIC*PKLNGGLGIRDMALSNHAHLCKIIWN 592
+ I+ + +WW Q K + ++ SWN + PK GGLG RD+ + N A L K W
Sbjct: 1043 LCDQISKMIAKYWWSN-QEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWR 1101
Query: 593 IVTNRNSFLSQQLKGKYFP 649
++ + +S S+ L+ KYFP
Sbjct: 1102 LIQDPDSLCSRVLRAKYFP 1120
Score = 50.8 bits (120), Expect(3) = 1e-26
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 3 ISHLLFADDAFIFCKANLNKARELLDALNTFCQITGQDINYTKSGVHFSKN 155
+SHLLFADD+ I C+AN +A++L L + + +GQ IN KS V FS N
Sbjct: 905 VSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPN 955
>gb|AAY22445.1| bZIP-like protein [Gossypium hirsutum]
Length = 237
Score = 62.8 bits (151), Expect(3) = 2e-26
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +2
Query: 425 INALQRDFWWGTPQGKKHPVYLKSWNFIC*PKLNGGLGIRDMALSNHAHLCKIIWNIVTN 604
I A+ R FWW + ++ ++ +W+ IC PK NGGLG + + L N A L K W I
Sbjct: 150 IQAICRKFWWKSVGDERSTSWI-AWDTICRPKRNGGLGFKHIPLFNQALLAKQAWRIFQY 208
Query: 605 RNSFLSQQLKGKYFP 649
S +SQ LK KYFP
Sbjct: 209 PGSLVSQILKAKYFP 223
Score = 52.0 bits (123), Expect(3) = 2e-26
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +1
Query: 223 KYLGTLLFLGQPKFEIFNGLISKVNNKIAGWKIKLLSQAARTVLIKSISSAIHLFHINIF 402
+YLG +G+ K EIF L ++ K GWK KLLS + +LIK++ AI F +++F
Sbjct: 81 RYLGLPYLVGRSKREIFQYLKDRIWKKAHGWKEKLLSHGGKEILIKAVLQAIPTFAMSVF 140
Query: 403 LLP 411
LP
Sbjct: 141 KLP 143
Score = 50.4 bits (119), Expect(3) = 2e-26
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +3
Query: 3 ISHLLFADDAFIFCKANLNKARELLDALNTFCQITGQDINYTKSGVHFSKNM 158
+SHL FADD +F K ++ LL L T+ ++ GQ IN TKS + F+K+M
Sbjct: 8 LSHLFFADDCLLFLKDSVESIPTLLHVLTTYEKVLGQKINVTKSSIFFAKSM 59
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 57.8 bits (138), Expect(3) = 3e-26
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +1
Query: 190 SLDMRSIAIGEKYLGTLLFLGQPKFEIFNGLISKVNNKIAGWKIKLLSQAARTVLIKSIS 369
+L+M+ E+YLG +F+G+ + +IF+ L ++ +I GWK KLLS+A + +LIK+++
Sbjct: 994 ALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVA 1053
Query: 370 SAIHLFHINIFLLPHHTVHQCS 435
AI F + F L Q S
Sbjct: 1054 QAIPTFAMGCFELTKDLCDQIS 1075
Score = 56.2 bits (134), Expect(3) = 3e-26
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = +2
Query: 413 ITQSINALQRDFWWGTPQGKKHPVYLKSWNFIC*PKLNGGLGIRDMALSNHAHLCKIIWN 592
+ I+ + +WW Q K + ++ SWN + PK GGLG RD+ + N A L K W
Sbjct: 1070 LCDQISKMIAKYWWSN-QEKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWR 1128
Query: 593 IVTNRNSFLSQQLKGKYFP 649
++ + +S S+ L+ KYFP
Sbjct: 1129 LIQDPDSLCSRVLRAKYFP 1147
Score = 50.8 bits (120), Expect(3) = 3e-26
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +3
Query: 3 ISHLLFADDAFIFCKANLNKARELLDALNTFCQITGQDINYTKSGVHFSKN 155
+SHLLFADD+ I C+AN +A++L L + + +GQ IN KS V FS N
Sbjct: 932 VSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPN 982