BLASTX nr result

ID: Coptis21_contig00032868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032868
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]                         178   5e-43
ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]   172   3e-41
ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38

>dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
          Length = 514

 Score =  178 bits (451), Expect = 5e-43
 Identities = 83/103 (80%), Positives = 93/103 (90%)
 Frame = +2

Query: 2   EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181
           EGLI+RTKL GFVP+ ELV MDVSEEEKE NL +HSEKLALAYGILKTSPGTEIR+ KNL
Sbjct: 412 EGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNL 471

Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310
           R CYDCH+W+KMVS +L+RVI++RDRIRFHRFE GSCSC DYW
Sbjct: 472 RICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514


>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           [Vitis vinifera]
          Length = 523

 Score =  172 bits (436), Expect = 3e-41
 Identities = 78/103 (75%), Positives = 94/103 (91%)
 Frame = +2

Query: 2   EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181
           EGLI+RTKL GF+PA +LV MDVS+EE+E NL++HSEKLALAY ILKTSPGTEIR+SKNL
Sbjct: 421 EGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNL 480

Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310
           RTC+DCH WMK++SR+L+RVI++RDRIRFH+FE G CSC DYW
Sbjct: 481 RTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 523


>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
          Length = 562

 Score =  172 bits (436), Expect = 3e-41
 Identities = 78/103 (75%), Positives = 94/103 (91%)
 Frame = +2

Query: 2   EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181
           EGLI+RTKL GF+PA +LV MDVS+EE+E NL++HSEKLALAY ILKTSPGTEIR+SKNL
Sbjct: 460 EGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNL 519

Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310
           RTC+DCH WMK++SR+L+RVI++RDRIRFH+FE G CSC DYW
Sbjct: 520 RTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562


>ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|222859457|gb|EEE97004.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  172 bits (435), Expect = 3e-41
 Identities = 78/103 (75%), Positives = 92/103 (89%)
 Frame = +2

Query: 2   EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181
           EGLI+RTKL G+VP  +LV MDVSEEEKE NL +HSEKLALAYGILKT+ G E+R+SKNL
Sbjct: 409 EGLIQRTKLAGYVPTTDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNL 468

Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310
           R CYDCHSW+K+VSR+L+RVI++RDRIRFHRFE+G CSC DYW
Sbjct: 469 RICYDCHSWIKIVSRLLSRVIIVRDRIRFHRFENGLCSCGDYW 511


>ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g50990-like [Glycine max]
          Length = 569

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/103 (70%), Positives = 87/103 (84%)
 Frame = +2

Query: 2   EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181
           EGLI+R KL GF P  +LV MDVSEEEKE NL  HSEKLA+AY +LKTSPGT+IR+SKNL
Sbjct: 467 EGLIQRAKLEGFTPLTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNL 526

Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310
           R C DCH+W+K+VS++LNR I++RDRIRFH+FE G CSC DYW
Sbjct: 527 RICLDCHNWIKIVSKILNRKIIVRDRIRFHQFEGGVCSCKDYW 569


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