BLASTX nr result
ID: Coptis21_contig00032868
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032868 (336 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas] 178 5e-43 ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi... 172 3e-41 emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera] 172 3e-41 ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|2... 172 3e-41 ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containi... 162 3e-38 >dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas] Length = 514 Score = 178 bits (451), Expect = 5e-43 Identities = 83/103 (80%), Positives = 93/103 (90%) Frame = +2 Query: 2 EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181 EGLI+RTKL GFVP+ ELV MDVSEEEKE NL +HSEKLALAYGILKTSPGTEIR+ KNL Sbjct: 412 EGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNL 471 Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310 R CYDCH+W+KMVS +L+RVI++RDRIRFHRFE GSCSC DYW Sbjct: 472 RICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514 >ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Vitis vinifera] Length = 523 Score = 172 bits (436), Expect = 3e-41 Identities = 78/103 (75%), Positives = 94/103 (91%) Frame = +2 Query: 2 EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181 EGLI+RTKL GF+PA +LV MDVS+EE+E NL++HSEKLALAY ILKTSPGTEIR+SKNL Sbjct: 421 EGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNL 480 Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310 RTC+DCH WMK++SR+L+RVI++RDRIRFH+FE G CSC DYW Sbjct: 481 RTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 523 >emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera] Length = 562 Score = 172 bits (436), Expect = 3e-41 Identities = 78/103 (75%), Positives = 94/103 (91%) Frame = +2 Query: 2 EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181 EGLI+RTKL GF+PA +LV MDVS+EE+E NL++HSEKLALAY ILKTSPGTEIR+SKNL Sbjct: 460 EGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNL 519 Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310 RTC+DCH WMK++SR+L+RVI++RDRIRFH+FE G CSC DYW Sbjct: 520 RTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562 >ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa] Length = 511 Score = 172 bits (435), Expect = 3e-41 Identities = 78/103 (75%), Positives = 92/103 (89%) Frame = +2 Query: 2 EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181 EGLI+RTKL G+VP +LV MDVSEEEKE NL +HSEKLALAYGILKT+ G E+R+SKNL Sbjct: 409 EGLIQRTKLAGYVPTTDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNL 468 Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310 R CYDCHSW+K+VSR+L+RVI++RDRIRFHRFE+G CSC DYW Sbjct: 469 RICYDCHSWIKIVSRLLSRVIIVRDRIRFHRFENGLCSCGDYW 511 >ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990-like [Glycine max] Length = 569 Score = 162 bits (410), Expect = 3e-38 Identities = 73/103 (70%), Positives = 87/103 (84%) Frame = +2 Query: 2 EGLIKRTKLGGFVPAVELVFMDVSEEEKEANLSNHSEKLALAYGILKTSPGTEIRMSKNL 181 EGLI+R KL GF P +LV MDVSEEEKE NL HSEKLA+AY +LKTSPGT+IR+SKNL Sbjct: 467 EGLIQRAKLEGFTPLTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNL 526 Query: 182 RTCYDCHSWMKMVSRVLNRVIVMRDRIRFHRFESGSCSCNDYW 310 R C DCH+W+K+VS++LNR I++RDRIRFH+FE G CSC DYW Sbjct: 527 RICLDCHNWIKIVSKILNRKIIVRDRIRFHQFEGGVCSCKDYW 569