BLASTX nr result

ID: Coptis21_contig00032863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032863
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002318221.1| predicted protein [Populus trichocarpa] gi|222858894|gb|EEE96441.1|
           predicted protein [Populus trichocarpa]
          Length = 1337

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/87 (41%), Positives = 54/87 (62%)
 Frame = -2

Query: 261 SLALGNEDKQILSEVPEMEMPLDMHDENLEETIPYPCKVSESVYSVQQIANEYNMEQTNA 82
           ++   +E  Q+LSEV E+E  LD+    +E  + YP KV ESVYSV+ +  E++M++  A
Sbjct: 141 NVCFSDEGMQLLSEVSEIENDLDLLRPEIE--MQYPDKVQESVYSVEDVTLEFDMDE-KA 197

Query: 81  YSVEDDSSVQERNCLSPVRYPLLEVNE 1
            ++E D SVQE+       +PLLEV E
Sbjct: 198 CALEYDGSVQEQAHFHHNTFPLLEVEE 224


Top