BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032817
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532555.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica...    88   2e-15
dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Grou...    82   9e-14
ref|XP_003594788.1| F-box/kelch-repeat protein [Medicago truncat...    79   8e-13
dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica...    77   3e-12

>ref|XP_002532555.1| conserved hypothetical protein [Ricinus communis]
            gi|223527710|gb|EEF29816.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 690

 Score =  110 bits (275), Expect = 2e-22
 Identities = 63/178 (35%), Positives = 95/178 (53%), Gaps = 1/178 (0%)
 Frame = -2

Query: 662  YYVRLGSQAWTYRLIANHVKILLGNHNPVFYDGAFYCLSYERHLGVFDFKNNICEWRIL- 486
            Y+   G   W    I +      G ++PVFY+G FY L  + +L + +  +++  W +L 
Sbjct: 505  YFAFRGDTKWVLEQIDDDTDFTFGGNSPVFYNGVFYYLGEKGNLAILEIIDDMVTWEVLW 564

Query: 485  STPLPQKSFDQNYLVECNGEILSVFVGRNGSWVEVHKFNFWTKKWTKLRSLGDKMLFVSR 306
                P+    QN+LVEC+G +LSVFVG     VEV + +     W ++ +LG+ M+ VSR
Sbjct: 565  DLKSPRSHCHQNFLVECDGNLLSVFVGEFEGSVEVFRLSQSKMVWIRVENLGNYMVCVSR 624

Query: 305  STSMLLKATNKRNHNKIYFPISYNDENNCVFYSLETRKWHSSFGDFCREDIYNTKEQL 132
            S+S    A      NKI+FP  Y +  N VFYSL+T K+HS        + Y ++EQL
Sbjct: 625  SSSFSSLAKAPGMENKIFFPRFYGE--NIVFYSLDTNKFHSFDRQKIPIEFYISREQL 680


>dbj|BAD08724.1| F-box protein family-like [Oryza sativa Japonica Group]
            gi|42408294|dbj|BAD09449.1| F-box protein family-like
            [Oryza sativa Japonica Group] gi|125561733|gb|EAZ07181.1|
            hypothetical protein OsI_29426 [Oryza sativa Indica
            Group] gi|125603601|gb|EAZ42926.1| hypothetical protein
            OsJ_27515 [Oryza sativa Japonica Group]
          Length = 712

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
 Frame = -2

Query: 647  GSQAWTYRLIANHVKILLGNHNPVFYDGAFYCLSYERHLGVFDFKNNICEWRILSTPLP- 471
            G   W  +    +V   +G +NPV +DG FYCL  + +LGVFD  +N   WRIL  P P 
Sbjct: 523  GEPHWIEQEFEYNVSFPVGYNNPVMFDGKFYCLGRKGNLGVFDPTSNT--WRILDKPEPI 580

Query: 470  ---QKSFDQN-------YLVECNGEILSVFVGRNGSWVEVHKFNFWTKKWTKLRSLGDKM 321
                  F+++       YLV+ +GE++SVF+        V K N     W ++  +G   
Sbjct: 581  HVEMDLFEEDHIGREFCYLVDMDGELISVFLRNANELPRVFKLNRTEISWVEVEDIGGGA 640

Query: 320  LFVSRSTSMLLKATNKRNHNKIYFPISYNDENNCVFYSLETRKWHSSF 177
            LF+   +S  + + +  N N+IYFP  Y+ +   VFY +  + +  SF
Sbjct: 641  LFLDYRSSYGVASPDGGNGNRIYFP-RYSKDGKPVFYDMNKKTYSPSF 687


>dbj|BAD09445.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|125603599|gb|EAZ42924.1| hypothetical protein
            OsJ_27514 [Oryza sativa Japonica Group]
          Length = 760

 Score = 82.0 bits (201), Expect = 9e-14
 Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 8/174 (4%)
 Frame = -2

Query: 614  NHVKILLGNHNPVFYDGAFYCLSYERHLGVFDFKNNICEWRILSTPLPQKS----FDQN- 450
            + V   +  +NPV++ G FY L    +L VF+  NN  EWRIL  P P ++    +D+  
Sbjct: 587  DEVMFPVARNNPVYFRGEFYFLGQRGNLSVFNPGNN--EWRILDKPEPIRADLTPYDEGK 644

Query: 449  ---YLVECNGEILSVFVGRNGSWVEVHKFNFWTKKWTKLRSLGDKMLFVSRSTSMLLKAT 279
               Y+VE  GE+++VF         V K +    +W ++  +G   LF+    S+ L ++
Sbjct: 645  EACYMVELRGELIAVFHRNANEPPRVLKLDESKMEWVEIEDIGGGALFLDYRASIALPSS 704

Query: 278  NKRNHNKIYFPISYNDENNCVFYSLETRKWHSSFGDFCREDIYNTKEQLHVLGF 117
               + N+IYFP    D    +FY LE +K+   F        Y  KE ++ + F
Sbjct: 705  EAGHGNRIYFPKFSEDGKKAIFYDLEAKKYSPMF--------YGAKEPMNCVWF 750


>ref|XP_003594788.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355483836|gb|AES65039.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 354

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
 Frame = -2

Query: 590 NHNPVFYDGAFYCLSYERHLGVFDFKNNICEWRILSTP-LPQKSFDQNYLVECNGEILSV 414
           N +P++++G FYCLS +  L V +        + +  P  P      N+L+EC+G +L+V
Sbjct: 196 NISPIYHNGLFYCLSMKGKLRVIEATREKINLKEIEGPQAPYNKHFNNFLLECDGNLLAV 255

Query: 413 FVGRNGSWVEVHKFNFWTKKWTKLRSLGDKMLFVSRSTSMLLKATNKRNHNKIYFPISYN 234
                G  V+V K +  T  W K+ SL + MLFV ++    + A      NKIYFP  Y 
Sbjct: 256 LESSFGKGVKVFKLDESTMTWMKVESLKNHMLFVGKACFSTV-ANIPGMENKIYFPRFY- 313

Query: 233 DENNCVFYSLETRKWHSSFGD 171
              + VFYSL+T  +H+   D
Sbjct: 314 -RQSVVFYSLDTNNYHTFKND 333


>dbj|BAD08729.1| F-box protein family-like [Oryza sativa Japonica Group]
            gi|125603604|gb|EAZ42929.1| hypothetical protein
            OsJ_27518 [Oryza sativa Japonica Group]
          Length = 710

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
 Frame = -2

Query: 635  WTYRLIANHVKILLGNHNPVFYDGAFYCLSYERHLGVFDFKNNICEWRILSTPLP---QK 465
            W  +     V   +G +NPV + G FYCL  + +LG FD  +N   W IL  P P   + 
Sbjct: 525  WIEQRFEYDVPFPVGYNNPVMFCGKFYCLGRKGNLGAFDPTSNT--WEILDKPEPIHVEM 582

Query: 464  SFDQN--------YLVECNGEILSVFVGRNGSWVEVHKFNFWTKKWTKLRSLGDKMLFVS 309
               QN        YLV+  GE++SV +        V K +     W ++  +G   LF+ 
Sbjct: 583  DLLQNDHRGREFCYLVDLEGELISVLLHNASEAPRVFKLDLTKMSWVEVEDIGGGALFLD 642

Query: 308  RSTSMLLKATNKRNHNKIYFPISYNDENNCVFYSLETRKWHSSF 177
              TS  + + +  + N+IYFP  Y+ +   VFY ++ + ++ SF
Sbjct: 643  HRTSHGVGSPDGGHGNRIYFP-RYSVDRKPVFYDMDNKMYYPSF 685