BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032790
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...    92   4e-17
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    87   1e-15
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...    85   5e-15
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   1e-14

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/109 (38%), Positives = 66/109 (60%)
 Frame = -2

Query: 330 NAAGQDINRNKSKLFLGGLTEVRRERIKEVLNVQEGVMPEKYLGVPLMQGKVKSAILLSL 151
           + +GQ +N  KS +F GG+T+ R   I  +L    G +P  YLG P+ +GK K      +
Sbjct: 455 DCSGQIMNIRKSFIFAGGITDTRMNNIVNILGFNVGSLPFTYLGAPIFKGKPKGIHFQPI 514

Query: 150 VDKIKNRITSWQGKLLSLQGRATLIQSVLGSIPVYNMSVYKWPSTIIKK 4
            DK+K ++  W+  LLS+ GR  L++SV+ S+ V+ MS+Y WP  I+K+
Sbjct: 515 ADKVKAKLAKWKASLLSIAGRIQLVKSVVQSMLVHTMSIYSWPIKILKE 563


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/109 (40%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = -2

Query: 327  AAGQDINRNKSKL-FLGGLTEVRRERIKEVLNVQEGVMPEKYLGVPLMQGKVKSAILLSL 151
            A+GQ IN  KS++ +  G++  +++ +  +LN+++    EKYLG+P + G+ K AI  SL
Sbjct: 713  ASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSL 772

Query: 150  VDKIKNRITSWQGKLLSLQGRATLIQSVLGSIPVYNMSVYKWPSTIIKK 4
            +D+I  ++  W+ KLLS  G+  L++SV+ +IP Y M VYK+P  II+K
Sbjct: 773  IDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQK 821


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/101 (43%), Positives = 62/101 (61%)
 Frame = -2

Query: 309 NRNKSKLFLGGLTEVRRERIKEVLNVQEGVMPEKYLGVPLMQGKVKSAILLSLVDKIKNR 130
           N NKS +FL G+    RE+I  +L  +EG +P KYLGVPL+  ++K+     LVD+I ++
Sbjct: 24  NPNKSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRITSK 83

Query: 129 ITSWQGKLLSLQGRATLIQSVLGSIPVYNMSVYKWPSTIIK 7
           +  W  + LS  GR  LI SVL SI VY  S++  P  +IK
Sbjct: 84  VRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIK 124


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 35/93 (37%), Positives = 64/93 (68%)
 Frame = -2

Query: 282 GGLTEVRRERIKEVLNVQEGVMPEKYLGVPLMQGKVKSAILLSLVDKIKNRITSWQGKLL 103
           GG+++ R +++  V+   +G  P  YLGVP+ +GK K+  L  +VDKIK ++++W+  +L
Sbjct: 377 GGISDARLQQLINVIGFNKGSFPFNYLGVPIFKGKPKARFLQPIVDKIKTKLSNWKASIL 436

Query: 102 SLQGRATLIQSVLGSIPVYNMSVYKWPSTIIKK 4
           S+ GR  LI+SV  S+ ++ +++Y WPS ++K+
Sbjct: 437 SIAGRVQLIKSVAQSMLIHTITIYDWPSFLLKE 469


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/109 (39%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
 Frame = -2

Query: 327  AAGQDINRNKSKL-FLGGLTEVRRERIKEVLNVQEGVMPEKYLGVPLMQGKVKSAILLSL 151
            A+GQ IN +KS++ F  G++  ++E +  +L +++     KYLG+P + G+ ++AI  SL
Sbjct: 713  ASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSITGRSRTAIFDSL 772

Query: 150  VDKIKNRITSWQGKLLSLQGRATLIQSVLGSIPVYNMSVYKWPSTIIKK 4
            +D+I  ++  W+ KLLS  G+  L++SV+ +IP Y M VYK P +II+K
Sbjct: 773  MDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQK 821