BLASTX nr result

ID: Coptis21_contig00032785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032785
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37043.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002273575.1| PREDICTED: probable cellulose synthase A cat...    97   1e-18
emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera]    97   1e-18
gb|AAQ63935.1| cellulose synthase [Pinus radiata]                      97   2e-18
gb|AAT09898.1| cellulose synthase [Populus tremula x Populus tre...    96   4e-18

>emb|CBI37043.3| unnamed protein product [Vitis vinifera]
          Length = 904

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 6/80 (7%)
 Frame = +3

Query: 45  KEKNKGSHY------LYLQVRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPTTT 206
           +EK  G H+      +   VRVSALLTNG YILNL+ + YINNS  FLEAMCF+MDP + 
Sbjct: 325 REKRPGFHHNNKAGAMNALVRVSALLTNGTYILNLDSDHYINNSRTFLEAMCFLMDP-SN 383

Query: 207 NKVCYVQFPQRFDGVDAIDR 266
            K+C+VQFPQRF+GVDA DR
Sbjct: 384 QKICFVQFPQRFEGVDANDR 403


>ref|XP_002273575.1| PREDICTED: probable cellulose synthase A catalytic subunit 8
           [UDP-forming]-like [Vitis vinifera]
          Length = 887

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 6/80 (7%)
 Frame = +3

Query: 45  KEKNKGSHY------LYLQVRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPTTT 206
           +EK  G H+      +   VRVSALLTNG YILNL+ + YINNS  FLEAMCF+MDP + 
Sbjct: 350 REKRPGFHHNNKAGAMNALVRVSALLTNGTYILNLDSDHYINNSRTFLEAMCFLMDP-SN 408

Query: 207 NKVCYVQFPQRFDGVDAIDR 266
            K+C+VQFPQRF+GVDA DR
Sbjct: 409 QKICFVQFPQRFEGVDANDR 428


>emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera]
          Length = 1036

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 6/80 (7%)
 Frame = +3

Query: 45  KEKNKGSHY------LYLQVRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPTTT 206
           +EK  G H+      +   VRVSALLTNG YILNL+ + YINNS  FLEAMCF+MDP + 
Sbjct: 497 REKRPGFHHNNKAGAMNALVRVSALLTNGTYILNLDSDHYINNSRTFLEAMCFLMDP-SN 555

Query: 207 NKVCYVQFPQRFDGVDAIDR 266
            K+C+VQFPQRF+GVDA DR
Sbjct: 556 QKICFVQFPQRFEGVDANDR 575


>gb|AAQ63935.1| cellulose synthase [Pinus radiata]
          Length = 1096

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/73 (64%), Positives = 55/73 (75%)
 Frame = +3

Query: 48  EKNKGSHYLYLQVRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPTTTNKVCYVQ 227
           E +K +  +   VRVSA+LTNG Y+LNL+ + YINNS A  EAMCFMMDPT   KVCYVQ
Sbjct: 553 EHHKKAGAMNSLVRVSAVLTNGPYMLNLDCDHYINNSRALREAMCFMMDPTLGKKVCYVQ 612

Query: 228 FPQRFDGVDAIDR 266
           FPQRFDG+D  DR
Sbjct: 613 FPQRFDGIDRNDR 625


>gb|AAT09898.1| cellulose synthase [Populus tremula x Populus tremuloides]
          Length = 1096

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/82 (56%), Positives = 61/82 (74%), Gaps = 5/82 (6%)
 Frame = +3

Query: 36  VSRKEKNKGSHY-----LYLQVRVSALLTNGAYILNLEHNQYINNSNAFLEAMCFMMDPT 200
           VSR+++   +H+     +   +RVSA+L+N  Y+LN++ +QYINNS A  EAMCFMMDPT
Sbjct: 540 VSREKRQGSTHHKKAGAMNSLMRVSAVLSNAPYLLNVDCDQYINNSKALREAMCFMMDPT 599

Query: 201 TTNKVCYVQFPQRFDGVDAIDR 266
           +  KVCYVQFPQRFDG+D  DR
Sbjct: 600 SGKKVCYVQFPQRFDGIDRHDR 621


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