BLASTX nr result
ID: Coptis21_contig00032784
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00032784 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29825.3| unnamed protein product [Vitis vinifera] 126 2e-27 ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi... 126 2e-27 ref|XP_002529510.1| pentatricopeptide repeat-containing protein,... 113 1e-23 ref|NP_178072.1| pentatricopeptide repeat-containing protein [Ar... 107 8e-22 ref|XP_002889252.1| pentatricopeptide repeat-containing protein ... 107 8e-22 >emb|CBI29825.3| unnamed protein product [Vitis vinifera] Length = 722 Score = 126 bits (316), Expect = 2e-27 Identities = 54/105 (51%), Positives = 79/105 (75%) Frame = -1 Query: 315 LSYRFFLWAMRKKDLRSWASHNLMIDILVINNGFDLAWKVIQELKSIQLFIRPYAFTVLI 136 L +RFF+W R++ RSW +HNL+ID+L ++GFD WK+++ELK+ + I P F+VLI Sbjct: 79 LGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLI 138 Query: 135 TAYAKAGFEERAVECFGKMKEFNSVPNTLTFNIVLHLLVEKQVFL 1 AYAK+G E+AVE FGKMK+F P+ T+N +LH++V+K+VFL Sbjct: 139 AAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFL 183 >ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like [Vitis vinifera] Length = 798 Score = 126 bits (316), Expect = 2e-27 Identities = 54/105 (51%), Positives = 79/105 (75%) Frame = -1 Query: 315 LSYRFFLWAMRKKDLRSWASHNLMIDILVINNGFDLAWKVIQELKSIQLFIRPYAFTVLI 136 L +RFF+W R++ RSW +HNL+ID+L ++GFD WK+++ELK+ + I P F+VLI Sbjct: 79 LGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLI 138 Query: 135 TAYAKAGFEERAVECFGKMKEFNSVPNTLTFNIVLHLLVEKQVFL 1 AYAK+G E+AVE FGKMK+F P+ T+N +LH++V+K+VFL Sbjct: 139 AAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFL 183 >ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 804 Score = 113 bits (283), Expect = 1e-23 Identities = 53/105 (50%), Positives = 75/105 (71%) Frame = -1 Query: 315 LSYRFFLWAMRKKDLRSWASHNLMIDILVINNGFDLAWKVIQELKSIQLFIRPYAFTVLI 136 L +RFF+WA + + LRSW SHN++ID+L+ +NGF+L W+V++E+K I AFTVLI Sbjct: 74 LGFRFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLI 133 Query: 135 TAYAKAGFEERAVECFGKMKEFNSVPNTLTFNIVLHLLVEKQVFL 1 AYAK E+AVE F MK+F+ P+ T+N VLH++V K+V L Sbjct: 134 QAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVL 178 >ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated salt-inducible-like protein from Arabidopsis thaliana BAC gb|AL021637 [Arabidopsis thaliana] gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 780 Score = 107 bits (268), Expect = 8e-22 Identities = 50/104 (48%), Positives = 75/104 (72%) Frame = -1 Query: 315 LSYRFFLWAMRKKDLRSWASHNLMIDILVINNGFDLAWKVIQELKSIQLFIRPYAFTVLI 136 L +RFF+WA R++ LRS S L+ID+L +NG DL W+ ++ELKS + + Y F VLI Sbjct: 75 LGFRFFIWASRRERLRSRESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLI 134 Query: 135 TAYAKAGFEERAVECFGKMKEFNSVPNTLTFNIVLHLLVEKQVF 4 +AYAK G E+AVE FG+MKEF+ P+ T+N++L +++ ++VF Sbjct: 135 SAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVF 178 >ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 780 Score = 107 bits (268), Expect = 8e-22 Identities = 50/104 (48%), Positives = 74/104 (71%) Frame = -1 Query: 315 LSYRFFLWAMRKKDLRSWASHNLMIDILVINNGFDLAWKVIQELKSIQLFIRPYAFTVLI 136 L +RFF+WA R++ LRS S L+ID+L +NG DL W+ ++ELKS + + Y F VLI Sbjct: 75 LGFRFFIWASRRERLRSGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLI 134 Query: 135 TAYAKAGFEERAVECFGKMKEFNSVPNTLTFNIVLHLLVEKQVF 4 +AYAK G E+AVE FG+MKEF+ P+ T+N++L +++ + VF Sbjct: 135 SAYAKMGLAEKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVF 178