BLASTX nr result

ID: Coptis21_contig00032779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032779
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882606.1| hypothetical protein ARALYDRAFT_478226 [Arab...    86   2e-15
ref|NP_187525.1| uncharacterized protein [Arabidopsis thaliana] ...    85   5e-15
ref|NP_683652.1| uncharacterized protein [Arabidopsis thaliana] ...    70   1e-10

>ref|XP_002882606.1| hypothetical protein ARALYDRAFT_478226 [Arabidopsis lyrata subsp.
           lyrata] gi|297328446|gb|EFH58865.1| hypothetical protein
           ARALYDRAFT_478226 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = -3

Query: 325 GLPALQGWSLINCQHHYLSDVRDRSRKAFDFVEKQFWRSAAIRAFFEDGVDAVRDLMWHK 146
           G+  LQG+SL+   HHY     D+S++AF  VE+QF+      +++++  +A+RD MWHK
Sbjct: 163 GVIPLQGYSLVTTSHHY----NDQSKRAFSMVERQFFSRFDQFSWWKEDEEALRDAMWHK 218

Query: 145 SCHPIKVDLKYKWATDNNVHAMLVKAGCGSAAARLPAVE-AILKA 14
           + HP+K+  K + A  N +   L+ AG  SAA RLPA E A++KA
Sbjct: 219 AGHPVKISFKKEIACSNTIKQSLINAGIQSAAFRLPATEDAVMKA 263


>ref|NP_187525.1| uncharacterized protein [Arabidopsis thaliana]
           gi|5923678|gb|AAD56329.1|AC009326_16 hypothetical
           protein [Arabidopsis thaliana]
           gi|332641205|gb|AEE74726.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 397

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/108 (38%), Positives = 64/108 (59%)
 Frame = -3

Query: 325 GLPALQGWSLINCQHHYLSDVRDRSRKAFDFVEKQFWRSAAIRAFFEDGVDAVRDLMWHK 146
           G+  LQG+SL+   HHY     D+S++AF  VE+QF+      +++++  +A+RD MWHK
Sbjct: 163 GVIPLQGYSLVTTSHHY----NDKSKRAFSAVERQFFSRCDQLSWWKEDEEALRDAMWHK 218

Query: 145 SCHPIKVDLKYKWATDNNVHAMLVKAGCGSAAARLPAVEAILKAAMTY 2
           + HP+K+  K + A    +   L  AG GS A RLPA E ++  A  Y
Sbjct: 219 AGHPVKISFKKEIACSITIKQSLANAGIGSVACRLPATEDVVWKAEAY 266


>ref|NP_683652.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332644230|gb|AEE77751.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 259

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = -3

Query: 313 LQGWSLINCQHHYLSDVRDRSRKAFDFVEKQFWRSA-AIRAFFEDGVDAVRDLMWHKSCH 137
           LQG+SLI   + Y      +S + F  +E++ W     +  ++++ ++A+RD MW  + H
Sbjct: 4   LQGYSLITSLYQY----NFQSEEVFMAMEERVWTGCDQLSRWWKEDLNALRDAMWFNAGH 59

Query: 136 PIKVDLKYKWATDNNVHAMLVKAGCGSAAARLPAVEAILKAAMTY 2
           P+K+  K + A  N V  +LVK+G GSAAA LP +E  ++ A TY
Sbjct: 60  PVKISFKKETACSNTVKQLLVKSGLGSAAAMLPYLEPEVRKAKTY 104


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