BLASTX nr result

ID: Coptis21_contig00032756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00032756
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523824.1| conserved hypothetical protein [Ricinus comm...   201   5e-50
ref|XP_004140159.1| PREDICTED: uncharacterized protein LOC101218...   192   3e-47
ref|XP_003538110.1| PREDICTED: uncharacterized protein LOC100782...   192   3e-47
ref|XP_002274717.1| PREDICTED: uncharacterized protein LOC100265...   188   5e-46
gb|AFK41071.1| unknown [Medicago truncatula]                          186   1e-45

>ref|XP_002523824.1| conserved hypothetical protein [Ricinus communis]
           gi|223536912|gb|EEF38550.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score =  201 bits (511), Expect = 5e-50
 Identities = 96/132 (72%), Positives = 113/132 (85%)
 Frame = -3

Query: 398 VISISLTSFKLSIPVLDADFILTVHVTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQ 219
           +ISIS TSFKL++PVLDAD +LTVHVTNPNI  I+YS T+MSIFYDGSLLGSA VEAGSQ
Sbjct: 38  LISISFTSFKLNLPVLDADLLLTVHVTNPNITSIHYSSTSMSIFYDGSLLGSAQVEAGSQ 97

Query: 218 PAKSCQMIKLAGRLSGLELAHHGKKFLADVAKREMELDAAVDIQGTAKVLCWTHRFKVHV 39
           PA+SC++++L  RL GL+LAHH  KF +DVAKR+M LDA VDI+G AKVL W H+FKVHV
Sbjct: 98  PARSCKLLRLQARLDGLQLAHHASKFFSDVAKRQMLLDAKVDIEGAAKVLWWDHKFKVHV 157

Query: 38  DSHIVVDPIFLD 3
           DSH  VDP+FLD
Sbjct: 158 DSHTTVDPVFLD 169


>ref|XP_004140159.1| PREDICTED: uncharacterized protein LOC101218134 [Cucumis sativus]
           gi|449481051|ref|XP_004156067.1| PREDICTED:
           uncharacterized LOC101218134 [Cucumis sativus]
          Length = 183

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/132 (68%), Positives = 111/132 (84%)
 Frame = -3

Query: 398 VISISLTSFKLSIPVLDADFILTVHVTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQ 219
           +ISI  TSFKL  PV+D + ILTVHVTNPN+ PI+YS T MSIFY+GSLLGSA V+AGSQ
Sbjct: 37  LISIKFTSFKLKPPVVDTELILTVHVTNPNVAPIHYSSTAMSIFYEGSLLGSAQVDAGSQ 96

Query: 218 PAKSCQMIKLAGRLSGLELAHHGKKFLADVAKREMELDAAVDIQGTAKVLCWTHRFKVHV 39
             +SCQ+++L  RL GL+LAHHG +F++DVAKREM LDA+VDI G A+VL W+H+FKVHV
Sbjct: 97  QPRSCQVLRLPARLDGLKLAHHGSRFISDVAKREMVLDASVDIGGFARVLWWSHKFKVHV 156

Query: 38  DSHIVVDPIFLD 3
           DSH+ VDP+FLD
Sbjct: 157 DSHLTVDPVFLD 168


>ref|XP_003538110.1| PREDICTED: uncharacterized protein LOC100782945 [Glycine max]
          Length = 191

 Score =  192 bits (487), Expect = 3e-47
 Identities = 91/132 (68%), Positives = 110/132 (83%)
 Frame = -3

Query: 398 VISISLTSFKLSIPVLDADFILTVHVTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQ 219
           +ISI+ TS KL+ P+LDA+ +LTVHVTNPNI PI+YS T+MSIFY GSLLGSA V+AGSQ
Sbjct: 38  LISINFTSLKLNFPLLDAEVLLTVHVTNPNIAPIHYSSTSMSIFYQGSLLGSAQVQAGSQ 97

Query: 218 PAKSCQMIKLAGRLSGLELAHHGKKFLADVAKREMELDAAVDIQGTAKVLCWTHRFKVHV 39
           P +SCQ+++L  RL  LELAHH  +FL DVA+REM LDAAVDI GTA+V+ W H FKVHV
Sbjct: 98  PPRSCQLLRLPARLHALELAHHATRFLHDVARREMFLDAAVDIAGTARVMWWDHNFKVHV 157

Query: 38  DSHIVVDPIFLD 3
           DSH+ VDP+FLD
Sbjct: 158 DSHVTVDPVFLD 169


>ref|XP_002274717.1| PREDICTED: uncharacterized protein LOC100265664 [Vitis vinifera]
           gi|296084897|emb|CBI28306.3| unnamed protein product
           [Vitis vinifera]
          Length = 184

 Score =  188 bits (477), Expect = 5e-46
 Identities = 92/133 (69%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
 Frame = -3

Query: 398 VISISLTSFKLSIPVLDADFILTVHVTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQ 219
           +ISISLTSFK + PVLDA+ ILTVHVTNPNI PI+YS T MSIFYDGS LGSA ++AGSQ
Sbjct: 37  LISISLTSFKFNFPVLDAEVILTVHVTNPNIAPIHYSSTAMSIFYDGSHLGSAQIDAGSQ 96

Query: 218 PAKSCQMIKLAGRLSGLE-LAHHGKKFLADVAKREMELDAAVDIQGTAKVLCWTHRFKVH 42
             KSCQ+++L  RL GLE L  H  +FLAD+ +REM LDA VDI+G AKVL W H+FKVH
Sbjct: 97  APKSCQVLRLPARLDGLELLTQHAGRFLADIRRREMTLDATVDIEGAAKVLWWDHKFKVH 156

Query: 41  VDSHIVVDPIFLD 3
           VDSH+VVDP++LD
Sbjct: 157 VDSHVVVDPLYLD 169


>gb|AFK41071.1| unknown [Medicago truncatula]
          Length = 187

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/132 (68%), Positives = 109/132 (82%)
 Frame = -3

Query: 398 VISISLTSFKLSIPVLDADFILTVHVTNPNIVPINYSPTTMSIFYDGSLLGSALVEAGSQ 219
           +ISI+ TS K S+PV+DA+ +LTVHVTNPNI PINYS TTMSIFY+GSLLGSA V+AGSQ
Sbjct: 39  LISINFTSLKPSLPVVDAEVLLTVHVTNPNIAPINYSSTTMSIFYEGSLLGSAPVQAGSQ 98

Query: 218 PAKSCQMIKLAGRLSGLELAHHGKKFLADVAKREMELDAAVDIQGTAKVLCWTHRFKVHV 39
           P +SCQ+++L  RL  L LA H  + ++DVAKREM LDAAVDI GTA+VL W H+FKV V
Sbjct: 99  PPRSCQLLRLPARLKALRLAKHASRVMSDVAKREMVLDAAVDIAGTARVLWWDHKFKVRV 158

Query: 38  DSHIVVDPIFLD 3
           +SHI VDP+FLD
Sbjct: 159 NSHITVDPVFLD 170


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